ggKbase home page

NECEvent2014_5_2_scaffold_272

Alias: 175_001_scaffold_272

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_2_scaffold_272_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(102..608)
DNA (507bp) protein (169aa)
UPI0003D5CFB9 related cluster n=1 Tax=unknown RepID=UPI0003D5CFB9 rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativi
ribosome maturation factor rimM
NECEvent2014_5_2_scaffold_272_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(608..1015)
DNA (408bp) protein (136aa)
UPI0003D6484B related cluster n=1 Tax=unknown RepID=UPI0003D6484B
Uncharacterized protein {ECO:0000313|EMBL:ETI86377.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
Protein of unknown function DUF2869
NECEvent2014_5_2_scaffold_272_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1024..1251)
DNA (228bp) protein (76aa)
UPI0003D61236 related cluster n=1 Tax=unknown RepID=UPI0003D61236
UPF0109 protein Q612_NSC00306G0011 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativico
RNA-binding protein
NECEvent2014_5_2_scaffold_272_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(1266..1529)
DNA (264bp) protein (88aa)
UPI0003D64F5E related cluster n=1 Tax=unknown RepID=UPI0003D64F5E
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succ
30S ribosomal protein S16
NECEvent2014_5_2_scaffold_272_5
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1559..2914)
DNA (1356bp) protein (452aa)
UPI0003D5949A related cluster n=1 Tax=unknown RepID=UPI0003D5949A rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
signal recognition particle protein
NECEvent2014_5_2_scaffold_272_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2896..3246)
DNA (351bp) protein (117aa)
UPI0003D6236D related cluster n=1 Tax=unknown RepID=UPI0003D6236D
UPF0122 protein Q612_NSC00306G0008 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativico
putative helix-turn-helix protein YlxM/p13 family protein
NECEvent2014_5_2_scaffold_272_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3321..6761)
DNA (3441bp) protein (1147aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativ
UPI0003D5D1BE related cluster n=1 Tax=unknown RepID=UPI0003D5D1BE rbh
pyruvate carboxylase
NECEvent2014_5_2_scaffold_272_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7010..7186
DNA (177bp) protein (59aa)
UPI0003D653AA related cluster n=1 Tax=unknown RepID=UPI0003D653AA
Uncharacterized protein {ECO:0000313|EMBL:ETI86371.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
NECEvent2014_5_2_scaffold_272_9
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7246..7470
DNA (225bp) protein (75aa)
UPI0003D653AA related cluster n=1 Tax=unknown RepID=UPI0003D653AA
Uncharacterized protein {ECO:0000313|EMBL:KGF12283.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_2_scaffold_272_trna_1
unknown

Not on your lists

comp(7722..7802)
DNA (81bp)
transferRNA
NECEvent2014_5_2_scaffold_272_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8577..8882)
DNA (306bp) protein (102aa)
UPI0003D65E66 related cluster n=1 Tax=unknown RepID=UPI0003D65E66
DNA-binding protein HU {ECO:0000313|EMBL:ETI88564.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivo
histone family protein DNA-binding protein
NECEvent2014_5_2_scaffold_272_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8921..9964)
DNA (1044bp) protein (348aa)
UPI0003D5DAD3 related cluster n=1 Tax=unknown RepID=UPI0003D5DAD3 rbh
MazG family protein {ECO:0000313|EMBL:ETI88565.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivoran
mazG family protein
NECEvent2014_5_2_scaffold_272_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9964..11562)
DNA (1599bp) protein (533aa)
Stage V sporulation protein B n=1 Tax=Dialister succinatiphilus YIT 11850 RepID=H1CZI6_9FIRM rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KGF12290.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridia
polysaccharide biosynthesis protein
NECEvent2014_5_2_scaffold_272_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11566..14844)
DNA (3279bp) protein (1093aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1403945 species="Bacteria; F
UPI0003D5BEB1 related cluster n=1 Tax=unknown RepID=UPI0003D5BEB1 rbh
transcription-repair coupling factor
NECEvent2014_5_2_scaffold_272_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14915..15397)
DNA (483bp) protein (161aa)
UPI0003D65464 related cluster n=1 Tax=unknown RepID=UPI0003D65464 rbh
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:ETI87070.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativic
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
NECEvent2014_5_2_scaffold_272_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15394..15753)
DNA (360bp) protein (120aa)
UPI0003D5DE3F related cluster n=1 Tax=unknown RepID=UPI0003D5DE3F
Dihydroneopterin aldolase {ECO:0000313|EMBL:ETI87071.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinic
dienelactone hydrolase
NECEvent2014_5_2_scaffold_272_16
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15740..16513)
DNA (774bp) protein (258aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
UPI0003D5D762 related cluster n=1 Tax=unknown RepID=UPI0003D5D762 rbh
dihydropteroate synthase
Displaying 17 items

View Taxonomy