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NECEvent2014_5_2_scaffold_340

Alias: 175_001_scaffold_340

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_2_scaffold_340_1
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..227)
DNA (225bp) protein (75aa)
UPI0003D5D91F related cluster n=1 Tax=unknown RepID=UPI0003D5D91F
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. In
Translation initiation factor IF-2, N-terminal region.
NECEvent2014_5_2_scaffold_340_2
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(239..544)
DNA (306bp) protein (102aa)
UPI0003D5EEA8 related cluster n=1 Tax=unknown RepID=UPI0003D5EEA8
Uncharacterized protein {ECO:0000313|EMBL:KGF11205.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
ribosomal protein L7Ae/L30e/S12e/Gadd45
NECEvent2014_5_2_scaffold_340_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(541..807)
DNA (267bp) protein (89aa)
UPI0003D5BC86 related cluster n=1 Tax=unknown RepID=UPI0003D5BC86
Uncharacterized protein {ECO:0000313|EMBL:ETI86530.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_2_scaffold_340_4
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(791..1957)
DNA (1167bp) protein (389aa)
UPI0003D694C7 related cluster n=1 Tax=unknown RepID=UPI0003D694C7 rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedi
NusA antitermination factor
NECEvent2014_5_2_scaffold_340_5
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1971..2429)
DNA (459bp) protein (153aa)
UPI0003D6488C related cluster n=1 Tax=unknown RepID=UPI0003D6488C
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incer
ribosome maturation factor rimP
NECEvent2014_5_2_scaffold_340_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2549..3208)
DNA (660bp) protein (220aa)
UPI0003D5D647 related cluster n=1 Tax=unknown RepID=UPI0003D5D647 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI86527.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_2_scaffold_340_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3210..3767)
DNA (558bp) protein (186aa)
UPI0003D63F61 related cluster n=1 Tax=unknown RepID=UPI0003D63F61 rbh
Transglycosylase SLT protein {ECO:0000313|EMBL:ETI86526.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succi
Lytic transglycosylase catalytic
NECEvent2014_5_2_scaffold_340_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3760..4365)
DNA (606bp) protein (202aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1403945 species="Bacteria; F
coaE; dephospho-CoA kinase (EC:2.7.1.24)
UPI0003D6140E related cluster n=1 Tax=unknown RepID=UPI0003D6140E rbh
NECEvent2014_5_2_scaffold_340_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4368..5180)
DNA (813bp) protein (271aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 2.7.1.24)
UPI0003D60EAA related cluster n=1 Tax=unknown RepID=UPI0003D60EAA rbh
NECEvent2014_5_2_scaffold_340_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5180..7774)
DNA (2595bp) protein (865aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccu
UPI0003D61FA6 related cluster n=1 Tax=unknown RepID=UPI0003D61FA6 rbh
DNA polymerase I
NECEvent2014_5_2_scaffold_340_11
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7789..8814
DNA (1026bp) protein (342aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. I
UPI0003D5C27C related cluster n=1 Tax=unknown RepID=UPI0003D5C27C rbh
pseudouridine synthase, RluA family
NECEvent2014_5_2_scaffold_340_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8833..9762
DNA (930bp) protein (310aa)
fructose-1,6-bisphosphate aldolase, class II (EC:4.1.2.13)
UPI0003D63B53 related cluster n=1 Tax=unknown RepID=UPI0003D63B53 rbh
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:ETI86521.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Nega
NECEvent2014_5_2_scaffold_340_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9802..10365)
DNA (564bp) protein (188aa)
UPI0003D5E6D3 related cluster n=1 Tax=unknown RepID=UPI0003D5E6D3 rbh
DSBA oxidoreductase {ECO:0000313|EMBL:ETI86520.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivoran
2-hydroxychromene-2-carboxylate isomerase
NECEvent2014_5_2_scaffold_340_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10450..10806
DNA (357bp) protein (119aa)
UPI0003D6183F related cluster n=1 Tax=unknown RepID=UPI0003D6183F
ArsC family protein {ECO:0000313|EMBL:ETI86519.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivoran
ArsC family protein
NECEvent2014_5_2_scaffold_340_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10816..11331
DNA (516bp) protein (172aa)
UPI0003D5D8FC related cluster n=1 Tax=unknown RepID=UPI0003D5D8FC rbh
Nitroreductase {ECO:0000313|EMBL:ETI86518.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DOR
nitroreductase
NECEvent2014_5_2_scaffold_340_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11561..13033)
DNA (1473bp) protein (491aa)
UPI0003D5A9AE related cluster n=1 Tax=unknown RepID=UPI0003D5A9AE rbh
Ferrous iron transport protein B {ECO:0000313|EMBL:ETI86516.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus s
ferrous iron transport protein B
Displaying 16 items

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