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NECEvent2014_5_2_scaffold_403

Alias: 175_001_scaffold_403

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_2_scaffold_403_1
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38..1774
DNA (1737bp) protein (579aa)
UPI0003D59681 related cluster n=1 Tax=unknown RepID=UPI0003D59681 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF12563.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
ABC transporter
NECEvent2014_5_2_scaffold_403_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1771..2598
DNA (828bp) protein (276aa)
UPI0003D5BD26 related cluster n=1 Tax=unknown RepID=UPI0003D5BD26 rbh
TRNA/rRNA methyltransferase SpoU {ECO:0000313|EMBL:ETI85878.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus s
RNA methyltransferase
NECEvent2014_5_2_scaffold_403_3
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2555..2737
DNA (183bp) protein (61aa)
UPI0003D5F59C related cluster n=1 Tax=unknown RepID=UPI0003D5F59C
Uncharacterized protein {ECO:0000313|EMBL:KGF12565.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_2_scaffold_403_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3158..3451
DNA (294bp) protein (98aa)
UPI0003D68975 related cluster n=1 Tax=unknown RepID=UPI0003D68975
Uncharacterized protein {ECO:0000313|EMBL:ETI85875.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein; K09121 hypothetical protein
NECEvent2014_5_2_scaffold_403_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3581..4519
DNA (939bp) protein (313aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus
UPI0003D632B1 related cluster n=1 Tax=unknown RepID=UPI0003D632B1 rbh
ribonuclease HIII
NECEvent2014_5_2_scaffold_403_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4529..5380
DNA (852bp) protein (284aa)
UPI0003D5FD89 related cluster n=1 Tax=unknown RepID=UPI0003D5FD89 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI85873.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_2_scaffold_403_7
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5377..6399
DNA (1023bp) protein (341aa)
UPI0003D5D6FF related cluster n=1 Tax=unknown RepID=UPI0003D5D6FF rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF12568.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
hypothetical protein
NECEvent2014_5_2_scaffold_403_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6406..6855
DNA (450bp) protein (150aa)
UPI0003D59C37 related cluster n=1 Tax=unknown RepID=UPI0003D59C37
UPF0735 ACT domain-containing protein HMPREF1633_00570 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedi
amino acid-binding ACT protein
NECEvent2014_5_2_scaffold_403_9
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6866..8176
DNA (1311bp) protein (437aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI.
UPI0003D59793 related cluster n=1 Tax=unknown RepID=UPI0003D59793 rbh
homoserine dehydrogenase
NECEvent2014_5_2_scaffold_403_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8163..9086
DNA (924bp) protein (308aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
UPI0003D5A088 related cluster n=1 Tax=unknown RepID=UPI0003D5A088 rbh
Homoserine kinase
NECEvent2014_5_2_scaffold_403_trna_1
unknown

Not on your lists

9105..9178
DNA (74bp)
transferRNA
NECEvent2014_5_2_scaffold_403_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9293..9697
DNA (405bp) protein (135aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
UPI0003D5DE47 related cluster n=1 Tax=unknown RepID=UPI0003D5DE47
nucleoside diphosphate kinase
NECEvent2014_5_2_scaffold_403_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9707..10216
DNA (510bp) protein (170aa)
UPI0003D5965D related cluster n=1 Tax=unknown RepID=UPI0003D5965D rbh
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:ETI84696.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicocc
ATP/cobalamin adenosyltransferase
NECEvent2014_5_2_scaffold_403_13
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10248..10625)
DNA (378bp) protein (126aa)
UPI0003D63647 related cluster n=1 Tax=unknown RepID=UPI0003D63647
Uncharacterized protein {ECO:0000313|EMBL:KGF12573.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_2_scaffold_403_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10700..11275
DNA (576bp) protein (192aa)
cobU; putative adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase (EC:2.7.1.156 2.7.7.62)
UPI0003D617A2 related cluster n=1 Tax=unknown RepID=UPI0003D617A2 rbh
Adenosylcobalamin biosynthesis protein CobU {ECO:0000313|EMBL:ETI84694.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negat
NECEvent2014_5_2_scaffold_403_15
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11285..12829
DNA (1545bp) protein (515aa)
UPI0003D5F7BA related cluster n=1 Tax=unknown RepID=UPI0003D5F7BA rbh
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.
Cobyric acid synthase
NECEvent2014_5_2_scaffold_403_16
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12826..13776
DNA (951bp) protein (317aa)
UPI0003D64D99 related cluster n=1 Tax=unknown RepID=UPI0003D64D99 rbh
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostr
cobalamin biosynthesis protein CobD
Displaying 17 items

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