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NECEvent2014_5_2_scaffold_542

Alias: 175_001_scaffold_542

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_2_scaffold_542_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3..560
DNA (558bp) protein (186aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
UPI0003D624B6 related cluster n=1 Tax=unknown RepID=UPI0003D624B6 rbh
rRNA small subunit methyltransferase I
NECEvent2014_5_2_scaffold_542_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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560..2551
DNA (1992bp) protein (664aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
UPI0003D62E4A related cluster n=1 Tax=unknown RepID=UPI0003D62E4A rbh
methionyl-tRNA synthetase
NECEvent2014_5_2_scaffold_542_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2553..3323
DNA (771bp) protein (257aa)
UPI0003D693EC related cluster n=1 Tax=unknown RepID=UPI0003D693EC rbh
Deoxyribonuclease, TatD family {ECO:0000313|EMBL:ETI88127.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus suc
TatD family hydrolase
NECEvent2014_5_2_scaffold_542_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3516..4511
DNA (996bp) protein (332aa)
UPI0003D610C6 related cluster n=1 Tax=unknown RepID=UPI0003D610C6 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI88126.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_2_scaffold_542_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4534..5412
DNA (879bp) protein (293aa)
UPI0003D6506F related cluster n=1 Tax=unknown RepID=UPI0003D6506F rbh
Inner-membrane translocator {ECO:0000313|EMBL:ETI88125.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succin
inner-membrane translocator
NECEvent2014_5_2_scaffold_542_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5412..6200
DNA (789bp) protein (263aa)
UPI0003D5BD91 related cluster n=1 Tax=unknown RepID=UPI0003D5BD91 rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETI88124.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicocc
ABC transporter
NECEvent2014_5_2_scaffold_542_7
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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6347..7870
DNA (1524bp) protein (508aa)
UPI0003D68B67 related cluster n=1 Tax=unknown RepID=UPI0003D68B67 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF09953.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_2_scaffold_542_8

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8191..8298
DNA (108bp) protein (36aa)
S-layer protein {ECO:0000313|EMBL:ETJ43090.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying 8 items

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