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NECEvent2014_5_2_scaffold_715

Alias: 175_001_scaffold_715

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_2_scaffold_715_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3..626
DNA (624bp) protein (208aa)
UPI0003D668AA related cluster n=1 Tax=unknown RepID=UPI0003D668AA rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selen
elongation factor Ts
NECEvent2014_5_2_scaffold_715_2
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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681..1412
DNA (732bp) protein (244aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
pyrH; uridylate kinase (EC:2.7.4.22)
UPI0003D591E9 related cluster n=1 Tax=unknown RepID=UPI0003D591E9 rbh
NECEvent2014_5_2_scaffold_715_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1405..1962
DNA (558bp) protein (186aa)
UPI0003D6679A related cluster n=1 Tax=unknown RepID=UPI0003D6679A rbh
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1403945 species="Bacteria;
ribosome recycling factor
NECEvent2014_5_2_scaffold_715_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1959..2222
DNA (264bp) protein (88aa)
UPI0003D696C5 related cluster n=1 Tax=unknown RepID=UPI0003D696C5
Uncharacterized protein {ECO:0000313|EMBL:ETI86120.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
NECEvent2014_5_2_scaffold_715_5
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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2206..2925
DNA (720bp) protein (240aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI.
UPI0003D65D04 related cluster n=1 Tax=unknown RepID=UPI0003D65D04 rbh
di-trans
NECEvent2014_5_2_scaffold_715_6
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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2928..3743
DNA (816bp) protein (272aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales
UPI0003D60AB4 related cluster n=1 Tax=unknown RepID=UPI0003D60AB4 rbh
phosphatidate cytidylyltransferase
NECEvent2014_5_2_scaffold_715_7
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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3740..4897
DNA (1158bp) protein (386aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
UPI0003D5AED7 related cluster n=1 Tax=unknown RepID=UPI0003D5AED7 rbh
NECEvent2014_5_2_scaffold_715_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4910..5947
DNA (1038bp) protein (346aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Inc
UPI0003D5B4F9 related cluster n=1 Tax=unknown RepID=UPI0003D5B4F9 rbh
RIP metalloprotease RseP
NECEvent2014_5_2_scaffold_715_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5962..6198
DNA (237bp) protein (79aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS0
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
UPI0003D5A67C related cluster n=1 Tax=unknown RepID=UPI0003D5A67C
Displaying 9 items

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