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NECEvent2014_5_2_scaffold_623_6

Organism: NECEvent2014_5_2_Negativicoccus_succinicivorans_52_9

near complete RP 48 / 55 BSCG 48 / 51 ASCG 12 / 38 MC: 3
Location: comp(4421..6508)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1403945 species="Bacteria; Firmicutes; Negativ similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 695.0
  • Bit_score: 1345
  • Evalue 0.0
UPI0003D67DBA related cluster n=1 Tax=unknown RepID=UPI0003D67DBA similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 695.0
  • Bit_score: 1345
  • Evalue 0.0
  • rbh
ribonuclease R similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 683.0
  • Bit_score: 666
  • Evalue 6.20e-189

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Taxonomy

Negativicoccus succinicivorans → Negativicoccus → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2088
ATGGCAAAACGAGTGATTGACCGAATGCAGGGATACAGTCCCGGGCAAATGGTAACGGGCGTATACAAAGGATACGCGACAAATTTCGGATTTTTGATTACCGACGATAAACATGAAGATATTTATATCGGCAAAGAACGTCGCGGTAATGCCATGCACAACGATACCGTACAGGTGGAAGTGCTCGAACGCAAATCACAGGCCGGTAAGTACGAAGGGCAGGTAGTACGGGTCGTCACGCACGCGAATGAAACGGTAGTCGGTACATTTGAATTGCAGAAAAATTTTGCGGTTGTAACGCCGGACGATGAGCGCATGGGGACGGACATTTATATTCCCGCCGATCAAATGCAAGATGCCAAAAGCGGTGCCAAGGTGCTGGTACGCATCACTAAATGGCCGGAAGCAAAGCGCATGGCGGAAGGCATTATCGAAGAAGTGCTCGGTTACGAGGGCGATAAAGGGTTGGATATCAGCTTGATTATCGCCAGCCACCATATCCCCAAAATATTTCCGAAAGAAGTTCTTGACGAAGCGGAACAAGCTGCGAAAATACCGATTACACCGGGGGATCGGATGGATTTCCGAGATCAGCCGATTATCACGATCGACGGTGCGGATGCCAAAGATTTTGACGATGCCGTATACTGTCGCAAATTGGACAACGGCAATACGGAGCTGGGCGTTCATATCGCCGATGTCAGCTGGTATGTGAAACGCGGTTCGGAATTGGATAAAGAAGCATTTCGCCGCGGTACCAGCGTGTATTTGGCAGATCGCGTTATTCCGATGTTGCCGGAAGTGCTTTCAAATGGTGTCTGCAGCTTAAATGAAGGTGTCGATCGCTATACCATGTCCGTCGTCATGGAAGTCAACAAAGCGGGCGAAGTGGTGAACTCTAAAATAGGCCCCGGCATCATTAAAAGTGCTCGTCGTTGTACCTACGAGGAAGTTCGTAAAGCACTGTTGGAAGATATTTATCCGGACAATTTAAAACCGCATCTTACGATGCTTAAAACGTGGCAGGAACTGGCGGAACGCTTGATCCGTATGCGTAGGAAACGCGGCGCTTTGAGTTTTGATTTCCCTGAATTCAAGATCCTGCTGGATGAAGAGGGTAAGCCGATTCAAATCGTCAAACGTGACCGCACCATTGCCGAAAAAATGGTCGAAGAGGCTATGTTGTTGGCCAATGAAACGATCGCACAGTTTATATCGAAAGAAAATCGGACCGCTATTTTCCGTGTGCACCAATCACCGGACAAAGAAAAACTGCAAATGGTTTTGAACCTGTTGCAGGTTTGGGGTGTGCAGATTGAATTGGGTGCGGACGTAGAGCCGAAAGACGTCCAAAAAATGTTGGCCATTGCTGAAGAACACGGCATCCAACCGATTATTGAAACAATGACGCTGCGTTCGTTACCGCAAGCCTATTATGATATTGTTAATTGGGGGCATTTCGGTTTGGCCTCCGAATGTTACACACATTTCACATCGCCGATTCGACGCTATCCGGATCTCGTGGTGCACCGCTTGGTCCGTGAAGTTTTGACGGGCAAATCGCAGCCGGCGCGCGATAAACAATGGTTAGTGCGCGCGGCGGAGCAGTCTTCGATGGCGGAGCGCCGATCGGTAGAAGCGGAACGCGAAACCAACGACTTGAAACGGACGGAATACATGGCGCCGTTCGTCGGCGAAGCCTTTGATGCGACGGTCACAGGACTTGCCAATTTCGGTATGTTTGTCGCCCTGGATAACGGGGCGGAGGGACTGGTTCATACTGACGTGATCGATCACGGTCAGGGCCATTTTGAGGAACGAGATTATACGTTTAAAGATCATGGCGGACAAACAATCTTTCAGTTGGGTGATACCGTTCGCGTAACATTGGCGAAAGCCGATATTGAACACCGCACACTCGACTTTCTGCTCGGAGAATTTAACTCGCTTGAAGAAGTCGCACAAGCATCGGCGGCCATTCGCAGTCGCAATAAGGGGAAGAGCAAAACGAAAGCGGCGAAAAAGCTGGCCAAGGCGAAACGACTAAAAAATAAACACGGCAAGCGAGGCAAACGCCGCCGTCGCTAG
PROTEIN sequence
Length: 696
MAKRVIDRMQGYSPGQMVTGVYKGYATNFGFLITDDKHEDIYIGKERRGNAMHNDTVQVEVLERKSQAGKYEGQVVRVVTHANETVVGTFELQKNFAVVTPDDERMGTDIYIPADQMQDAKSGAKVLVRITKWPEAKRMAEGIIEEVLGYEGDKGLDISLIIASHHIPKIFPKEVLDEAEQAAKIPITPGDRMDFRDQPIITIDGADAKDFDDAVYCRKLDNGNTELGVHIADVSWYVKRGSELDKEAFRRGTSVYLADRVIPMLPEVLSNGVCSLNEGVDRYTMSVVMEVNKAGEVVNSKIGPGIIKSARRCTYEEVRKALLEDIYPDNLKPHLTMLKTWQELAERLIRMRRKRGALSFDFPEFKILLDEEGKPIQIVKRDRTIAEKMVEEAMLLANETIAQFISKENRTAIFRVHQSPDKEKLQMVLNLLQVWGVQIELGADVEPKDVQKMLAIAEEHGIQPIIETMTLRSLPQAYYDIVNWGHFGLASECYTHFTSPIRRYPDLVVHRLVREVLTGKSQPARDKQWLVRAAEQSSMAERRSVEAERETNDLKRTEYMAPFVGEAFDATVTGLANFGMFVALDNGAEGLVHTDVIDHGQGHFEERDYTFKDHGGQTIFQLGDTVRVTLAKADIEHRTLDFLLGEFNSLEEVAQASAAIRSRNKGKSKTKAAKKLAKAKRLKNKHGKRGKRRRR*