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NECEvent2014_5_2_scaffold_623

Alias: 175_001_scaffold_623

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_2_scaffold_623_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1..153)
DNA (153bp) protein (51aa)
Exonuclease SbcCD, D subunit n=1 Tax=Selenomonas sp. oral taxon 138 str. F0429 RepID=L1N5X7_9FIRM
Nuclease SbcCD, D subunit {ECO:0000313|EMBL:ETI86696.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negat
exonuclease SbcD
NECEvent2014_5_2_scaffold_623_2
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(279..869)
DNA (591bp) protein (197aa)
UPI0003D60873 related cluster n=1 Tax=unknown RepID=UPI0003D60873 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11187.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_2_scaffold_623_3
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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990..2525
DNA (1536bp) protein (512aa)
UPI0003D60B0C related cluster n=1 Tax=unknown RepID=UPI0003D60B0C rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:KGF11188.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium
DEAD/DEAH box helicase
NECEvent2014_5_2_scaffold_623_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2560..3336)
DNA (777bp) protein (259aa)
UPI0003D65019 related cluster n=1 Tax=unknown RepID=UPI0003D65019 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI86699.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_2_scaffold_623_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3939..4406)
DNA (468bp) protein (156aa)
UPI0003D66608 related cluster n=1 Tax=unknown RepID=UPI0003D66608 rbh
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" s
ssrA-binding protein
NECEvent2014_5_2_scaffold_623_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4421..6508)
DNA (2088bp) protein (696aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1403945 species="Bacteria; Firmicutes; Negativ
UPI0003D67DBA related cluster n=1 Tax=unknown RepID=UPI0003D67DBA rbh
ribonuclease R
NECEvent2014_5_2_scaffold_623_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6551..6799)
DNA (249bp) protein (83aa)
UPI0003D633BD related cluster n=1 Tax=unknown RepID=UPI0003D633BD
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ETI86702.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicocc
preprotein translocase subunit SecG
NECEvent2014_5_2_scaffold_623_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6808..7134)
DNA (327bp) protein (109aa)
UPI0003D5F292 related cluster n=1 Tax=unknown RepID=UPI0003D5F292
RNA polymerase sigma-H factor {ECO:0000313|EMBL:ETI86703.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succ
RNA polymerase factor sigma-70
Displaying 8 items

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