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NECEvent2014_5_2_scaffold_1399_1

Organism: NECEvent2014_5_2_Negativicoccus_succinicivorans_52_9

near complete RP 48 / 55 BSCG 48 / 51 ASCG 12 / 38 MC: 3
Location: comp(2..454)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 151.0
  • Bit_score: 298
  • Evalue 4.80e-78
UPI0003D5B69C related cluster n=1 Tax=unknown RepID=UPI0003D5B69C similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 151.0
  • Bit_score: 298
  • Evalue 3.40e-78
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 153.0
  • Bit_score: 208
  • Evalue 1.00e-51

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Taxonomy

Negativicoccus succinicivorans → Negativicoccus → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 453
ATGATAGAAGAGAAGAATTTTGACATCGAAACAGTCGAACTGTCGGCTGACGAACGGTACGGTAAATTTGTTTGTGAACCGCTGGATCGCGGCTACGGCATTACCTTGGGTAACAGCTTGCGGCGCGTTTTGCTGTCCTCATTGGATGGCGTCGCCATTACCTCCATTAAAATCGATGGCGTATTGCACGAATTCTCCACCATCCCCGGTGTCCGGGAAGACGTGACCGATATCATCCTGAACCTCAAAAAAGTGTGCTTCAAAGCACACAGCGAAGCGGAATTTCCGTTAGAAGTCCGGGTCGATATAGAAAAAGAAGGCCAATTCACGGCCGGCGATATTGCCGTTCCGTCGGAATTGGAAATCTTGAACAGCGATCTGCACATTGCCACACTGGACAACGATGCCCATGTGGTAATGACACTTACCATTGATCGCGGTCACGGCTATGTG
PROTEIN sequence
Length: 151
MIEEKNFDIETVELSADERYGKFVCEPLDRGYGITLGNSLRRVLLSSLDGVAITSIKIDGVLHEFSTIPGVREDVTDIILNLKKVCFKAHSEAEFPLEVRVDIEKEGQFTAGDIAVPSELEILNSDLHIATLDNDAHVVMTLTIDRGHGYV