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NECEvent2014_5_2_scaffold_1399

Alias: 175_001_scaffold_1399

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_2_scaffold_1399_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2..454)
DNA (453bp) protein (151aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
UPI0003D5B69C related cluster n=1 Tax=unknown RepID=UPI0003D5B69C
DNA-directed RNA polymerase subunit alpha
NECEvent2014_5_2_scaffold_1399_2
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(501..884)
DNA (384bp) protein (128aa)
UPI0003D5E317 related cluster n=1 Tax=unknown RepID=UPI0003D5E317
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales ba
30S ribosomal protein S11
NECEvent2014_5_2_scaffold_1399_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(907..1272)
DNA (366bp) protein (122aa)
UPI0003D5C6DB related cluster n=1 Tax=unknown RepID=UPI0003D5C6DB
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succ
30S ribosomal protein S13
NECEvent2014_5_2_scaffold_1399_4
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1293..1406)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=4 Tax=Finegoldia magna RepID=D6S9Z6_FINMA
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Se
rpmJ; 50S ribosomal protein L36
NECEvent2014_5_2_scaffold_1399_5
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1430..1648)
DNA (219bp) protein (73aa)
UPI0003D65E07 related cluster n=1 Tax=unknown RepID=UPI0003D65E07
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostri
translation initiation factor IF-1
NECEvent2014_5_2_scaffold_1399_6
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1626..1946)
DNA (321bp) protein (107aa)
UPI0003D5A78A related cluster n=1 Tax=unknown RepID=UPI0003D5A78A
Uncharacterized protein {ECO:0000313|EMBL:KGF09480.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
ribosomal protein L14E
NECEvent2014_5_2_scaffold_1399_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1943..2695)
DNA (753bp) protein (251aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
UPI0003D5F5E6 related cluster n=1 Tax=unknown RepID=UPI0003D5F5E6 rbh
methionine aminopeptidase
NECEvent2014_5_2_scaffold_1399_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2692..3348)
DNA (657bp) protein (219aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS000796
UPI0003D5BC5F related cluster n=1 Tax=unknown RepID=UPI0003D5BC5F rbh
adenylate kinase
NECEvent2014_5_2_scaffold_1399_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3362..3442)
DNA (81bp) protein (27aa)
UPI0003D659FD related cluster n=1 Tax=unknown RepID=UPI0003D659FD
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativ
protein translocase subunit secY/sec61 alpha
Displaying 9 items

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