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NECEvent2014_5_2_scaffold_98

Alias: 175_001_scaffold_98

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_2_scaffold_98_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..172
DNA (171bp) protein (57aa)
Transketolase, pyridine binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIJ2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84797.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_5_2_scaffold_98_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

187..831
DNA (645bp) protein (215aa)
tal3; transaldolase Tal (EC:2.2.1.2)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
Probable transaldolase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW13_CLOSA rbh
NECEvent2014_5_2_scaffold_98_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

939..1277
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TJQ4_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD22961.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklun
NECEvent2014_5_2_scaffold_98_4
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1578..4412
DNA (2835bp) protein (945aa)
PTS system transcriptional activator n=1 Tax=Clostridium sp. DL-VIII RepID=G7MDC9_9CLOT
PTS system transcriptional activator {ECO:0000313|EMBL:EHI99227.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VII
transcription antiterminator
NECEvent2014_5_2_scaffold_98_5
Lactobacillus sp. wkB8, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4558..4980
DNA (423bp) protein (141aa)
PTS system, mannose-specific IIA component (EC:2.7.1.69)
PTS system, mannose-specific IIA component {ECO:0000313|EMBL:AIS08567.1}; EC=2.7.1.69 {ECO:0000313|EMBL:AIS08567.1};; TaxID=1545702 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacill
PTS system fructose subfamily IIA component n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AK34_SEBTE
NECEvent2014_5_2_scaffold_98_6
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4982..5455
DNA (474bp) protein (158aa)
Putative sorbose-specific phosphotransferase enzyme IIB component n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2QNX6_9FIRM
Putative sorbose-specific phosphotransferase enzyme IIB component {ECO:0000313|EMBL:ERK42998.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae;
PTS-EII; PTS system transporter subunit IIB
NECEvent2014_5_2_scaffold_98_7
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5469..6263
DNA (795bp) protein (265aa)
Phosphotransferase system PTS sorbose-specific IIC subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7MDD2_9CLOT
Phosphotransferase system PTS sorbose-specific IIC subunit {ECO:0000313|EMBL:EHI99230.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
PTS sorbose-specific transporter subunit IIC
NECEvent2014_5_2_scaffold_98_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6263..7063
DNA (801bp) protein (267aa)
Probable PTS system n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNL0_CLOPE
PTS system protein
Probable PTS system {ECO:0000313|EMBL:BAB80029.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Ty
NECEvent2014_5_2_scaffold_98_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7082..8347
DNA (1266bp) protein (422aa)
Neutral/alkaline non-lysosomal ceramidase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG57_9CLOT rbh
Neutral/alkaline non-lysosomal ceramidase {ECO:0000313|EMBL:EOR28005.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sart
neutral/alkaline non-lysosomal ceramidase
NECEvent2014_5_2_scaffold_98_10
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8361..9044
DNA (684bp) protein (228aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; Flags: Pr
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IL83_THETR
putative N-acetylmannosamine-6-phosphate epimerase
NECEvent2014_5_2_scaffold_98_11
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9053..9781
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CF73_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR28004.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_5_2_scaffold_98_12
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10015..12534
DNA (2520bp) protein (840aa)
cdr1; coenzyme A disulfide reductase Cdr (EC:1.8.1.14)
NAD(FAD)-dependent dehydrogenase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U924_9CLOT rbh
NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:EKQ52814.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
NECEvent2014_5_2_scaffold_98_13
unknown

Not on your lists

comp(12606..12932)
DNA (327bp) protein (109aa)

This feature has no annotations

NECEvent2014_5_2_scaffold_98_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13273..13833
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D7R8_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:CDX49972.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
NECEvent2014_5_2_scaffold_98_15
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13902..14072
DNA (171bp) protein (57aa)
Acetyltransferase, GNAT family n=3 Tax=Clostridium botulinum RepID=A5HYE7_CLOBH
Acetyltransferase family protein {ECO:0000313|EMBL:KIE46563.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense
GNAT family acetyltransferase
NECEvent2014_5_2_scaffold_98_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14118..14714
DNA (597bp) protein (199aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium botulinum RepID=B1IE93_CLOBK
acetyltransferase
GNAT family acetyltransferase {ECO:0000313|EMBL:KEJ03234.1}; TaxID=1379740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum A2B3 8
NECEvent2014_5_2_scaffold_98_17
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14837..15598
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IKV1_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EOS22403.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
3-oxoacyl-ACP reductase
NECEvent2014_5_2_scaffold_98_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15650..16396)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFY1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98797.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
RpiR family transcriptional regulator
NECEvent2014_5_2_scaffold_98_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16634..18226
DNA (1593bp) protein (531aa)
PTS system, glucose-like IIB component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHE3_9CLOT rbh
PTS system, glucose-like IIB component {ECO:0000313|EMBL:EEH98796.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_
PTS system glucose-like transporter subunit IIB
NECEvent2014_5_2_scaffold_98_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18265..19593
DNA (1329bp) protein (443aa)
maltose-6'-phosphate glucosidase (EC:3.2.1.122)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8A1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98795.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_5_2_scaffold_98_21
Listeria innocua, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19658..20389
DNA (732bp) protein (244aa)
Carbohydrate deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01246};; TaxID=1002366 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" s
Cellobiose phosphotransferase system YdjC-like protein n=1 Tax=Listeria monocytogenes FSL J1-208 RepID=H7CNW4_LISMN
hypothetical protein
NECEvent2014_5_2_scaffold_98_22
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20395..21534
DNA (1140bp) protein (380aa)
glycerate kinase n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A0910
hypothetical protein
Uncharacterized conserved protein, YHAD family {ECO:0000313|EMBL:AAK80778.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_5_2_scaffold_98_23
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21531..21929)
DNA (399bp) protein (133aa)
7,8-dihydro-8-oxoguanine-triphosphatase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B9G2_CLOBO
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KGM95635.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str.
NUDIX hydrolase
NECEvent2014_5_2_scaffold_98_24
Firmicutes bacterium M10-2, Firmicutes, Bacteria

Not on your lists

22147..22377
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium M10-2 RepID=R9LYX4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS60867.1}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
NECEvent2014_5_2_scaffold_98_25
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22416..22985
DNA (570bp) protein (190aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KNR8_CLOPH
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABX41669.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain AT
NECEvent2014_5_2_scaffold_98_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23054..23476
DNA (423bp) protein (141aa)
Putative membrane protein n=2 Tax=Clostridium botulinum B RepID=B2TNI0_CLOBB
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ACD24318.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Ekl
NECEvent2014_5_2_scaffold_98_27
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23496..23675
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2PWG8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK30800.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
NECEvent2014_5_2_scaffold_98_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23851..24015
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum A1 str. CFSAN002368 RepID=S8B2H2_CLOBO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA54318.1}; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Loch
NECEvent2014_5_2_scaffold_98_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24017..24583
DNA (567bp) protein (189aa)
Putative ATPase n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZLP8_CLOB0 rbh
putative ATPase
ATPase {ECO:0000313|EMBL:KEI98699.1}; TaxID=1379740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum A2B3 87.;"
NECEvent2014_5_2_scaffold_98_30
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25063..29667
DNA (4605bp) protein (1535aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GR73_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CDE29551.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococ
hypothetical protein
Displaying items 1-30 of 38 in total

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