ggKbase home page

NECEvent2014_5_2_scaffold_113

Alias: 175_001_scaffold_113

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_2_scaffold_113_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36..1544)
DNA (1509bp) protein (503aa)
UPF0371 protein HMPREF1084_02489 n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXC5_CLOBU rbh
UPF0371 protein HMPREF1084_02489 {ECO:0000256|HAMAP-Rule:MF_01567}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
hypothetical protein
NECEvent2014_5_2_scaffold_113_2
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1827..3188)
DNA (1362bp) protein (454aa)
Putative Mate efflux family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F0X1_9CLOT rbh
Putative Mate efflux family protein {ECO:0000313|EMBL:CDG02231.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei J
mate efflux family protein
NECEvent2014_5_2_scaffold_113_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3322..3693)
DNA (372bp) protein (124aa)
Description family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DA06_CLODI
Description family protein {ECO:0000313|EMBL:EQF24734.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium di
hypothetical protein
NECEvent2014_5_2_scaffold_113_4
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3918..4487)
DNA (570bp) protein (190aa)
xpt; Xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO
Xanthine phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=M8J9W2_CLOBU rbh
NECEvent2014_5_2_scaffold_113_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4471..5820)
DNA (1350bp) protein (450aa)
Xanthine permease n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UV61_CLOBO rbh
pbuX; xanthine permease family protein
Xanthine permease family protein {ECO:0000313|EMBL:AIY84255.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str.
NECEvent2014_5_2_scaffold_113_6
Enterococcus durans, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6237..7517)
DNA (1281bp) protein (427aa)
PTS system beta-glucoside-specific transporter subunit IIC n=1 Tax=Enterococcus durans RepID=UPI00032848BB rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1288492 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus durans IPLA 655.;"
gmuC; oligo-beta-mannoside permease IIC component
NECEvent2014_5_2_scaffold_113_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7626..8363)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3J4_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98560.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
binding-protein-dependent transport system inner membrane protein
NECEvent2014_5_2_scaffold_113_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8356..9054)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H818_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98561.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC transporter
NECEvent2014_5_2_scaffold_113_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9056..9985)
DNA (930bp) protein (310aa)
NlpA lipoprotein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BUN9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98562.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_5_2_scaffold_113_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10137..11051
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHL2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99011.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
UbiA prenyltransferase
NECEvent2014_5_2_scaffold_113_11
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11348..12517)
DNA (1170bp) protein (390aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase {ECO:0000313|EMBL:CDM67365.1}; EC=2.6.1.- {ECO:0000313|EMBL:CDM67365.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
Aminotransferase, class I/II n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHP8_9CLOT rbh
NECEvent2014_5_2_scaffold_113_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12514..12996)
DNA (483bp) protein (161aa)
AsnC family transcriptional regulator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BUB2_9CLOT
AsnC family transcriptional regulator {ECO:0000313|EMBL:EOR20607.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagof
asnC family protein
NECEvent2014_5_2_scaffold_113_13
unknown

Not on your lists

comp(13354..13476)
DNA (123bp) protein (41aa)

This feature has no annotations

NECEvent2014_5_2_scaffold_113_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13619..14803)
DNA (1185bp) protein (395aa)
Pyridoxal-phosphate-dependent aminotransferase family n=2 Tax=Clostridium botulinum B RepID=B2TQM1_CLOBB rbh
aspartate aminotransferase
Putative aromatic amino acid aminotransferase {ECO:0000313|EMBL:CDH92196.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium b
NECEvent2014_5_2_scaffold_113_15
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14824..15639)
DNA (816bp) protein (272aa)
hypothetical protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
transcriptional regulator TrmB
NECEvent2014_5_2_scaffold_113_16
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15653..15958)
DNA (306bp) protein (102aa)
Prediced branched-chain amino acid transport protein, related to AzlD n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NKW1_DESTT
branched-chain amino acid transport protein
Prediced branched-chain amino acid transport protein, related to AzlD {ECO:0000313|EMBL:CCK82216.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobact
NECEvent2014_5_2_scaffold_113_17
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15951..16673)
DNA (723bp) protein (241aa)
Putative branched-chain amino acid permease (Azaleucine resistance) n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K722_HALHC
putative branched-chain amino acid permease (azaleucine resistance)
Putative branched-chain amino acid permease (Azaleucine resistance) {ECO:0000313|EMBL:AGB41087.1}; Flags: Precursor;; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacte
NECEvent2014_5_2_scaffold_113_18
unknown

Not on your lists

comp(16881..17000)
DNA (120bp) protein (40aa)

This feature has no annotations

NECEvent2014_5_2_scaffold_113_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17099..18304)
DNA (1206bp) protein (402aa)
Methyltransferase n=2 Tax=Clostridium botulinum B RepID=B2TKC3_CLOBB rbh
Uncharacterized protein {ECO:0000313|EMBL:CDH90476.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklun
methyltransferase
NECEvent2014_5_2_scaffold_113_20
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18386..20323)
DNA (1938bp) protein (646aa)
NADH oxidase n=1 Tax=[Clostridium] glycolicum RepID=UPI00037B3C07 rbh
NADH oxidase {ECO:0000313|EMBL:KHS58053.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
NADH:flavin oxidoreductase
NECEvent2014_5_2_scaffold_113_21
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20511..21089)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00035C5FF5
TetR family transcriptional regulator {ECO:0000313|EMBL:KHS58052.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrispo
TetR family transcriptional regulator
NECEvent2014_5_2_scaffold_113_22
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21179..22399)
DNA (1221bp) protein (407aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ85291.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
NECEvent2014_5_2_scaffold_113_23
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22389..23123)
DNA (735bp) protein (245aa)
Putative Two component transcriptional regulator,LytTR family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EN00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ85290.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
response regulator
NECEvent2014_5_2_scaffold_113_24
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23629..24042)
DNA (414bp) protein (138aa)
Acetyltransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BZV9_9CLOT
Acetyltransferase {ECO:0000313|EMBL:EOR20491.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
acetyltransferase
NECEvent2014_5_2_scaffold_113_25
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24398..25537)
DNA (1140bp) protein (380aa)
DHHW family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VKI8_CLOBI rbh
DHHW family protein {ECO:0000313|EMBL:EQK41177.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans
hypothetical protein
NECEvent2014_5_2_scaffold_113_26
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25558..26958)
DNA (1401bp) protein (467aa)
algI; poly(beta-D-mannuronate) O-acetylase AlgI (EC:2.3.1.-)
MBOAT, membrane-bound O-acyltransferase family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VI71_CLOBI rbh
MBOAT, membrane-bound O-acyltransferase family protein {ECO:0000313|EMBL:EQK41178.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;"
NECEvent2014_5_2_scaffold_113_27
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26973..27407)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XS96_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA11656.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_5_2_scaffold_113_28
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27430..28236)
DNA (807bp) protein (269aa)
GDSL-like protein n=2 Tax=Turicibacter RepID=D4W8X6_9FIRM
GDSL-like protein {ECO:0000313|EMBL:EFF62632.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis P
phospholipase-subfamily protein
NECEvent2014_5_2_scaffold_113_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28357..29682)
DNA (1326bp) protein (442aa)
Amino acid permease family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R6F2_CLOPF rbh
Amino acid permease family protein {ECO:0000313|EMBL:EDT24100.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
amino acid ABC transporter permease
NECEvent2014_5_2_scaffold_113_30
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29773..31026)
DNA (1254bp) protein (418aa)
Transporter n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BBZ5_CLOBO rbh
Transporter {ECO:0000313|EMBL:KGM98293.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
transporter
Displaying items 1-30 of 32 in total

View Taxonomy