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NECEvent2014_5_2_scaffold_286

Alias: 175_001_scaffold_286

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_2_scaffold_286_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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82..561
DNA (480bp) protein (160aa)
purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=8 Tax=Clostridium perfringens RepID=Q0SV53_CLOPS
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
NECEvent2014_5_2_scaffold_286_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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561..1271
DNA (711bp) protein (237aa)
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase PurC (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase PurC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRK3_CLOSA rbh
NECEvent2014_5_2_scaffold_286_3
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1277..2707
DNA (1431bp) protein (477aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
purF; amidophosphoribosyltransferase PurF (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CAV2_9CLOT rbh
NECEvent2014_5_2_scaffold_286_4
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2718..3719
DNA (1002bp) protein (334aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Clostridium beijerinckii RepID=UPI00030DC4D9 rbh
phosphoribosylaminoimidazole synthetase
NECEvent2014_5_2_scaffold_286_5
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3707..4315
DNA (609bp) protein (203aa)
purN; phosphoribosylglycinamide formyltransferase PurN (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase PurN n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNB8_CLOSA rbh
NECEvent2014_5_2_scaffold_286_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4332..5837
DNA (1506bp) protein (502aa)
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Clostridium sp. DL-VIII RepID=G7M1Q2_9CLOT rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
NECEvent2014_5_2_scaffold_286_7
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5873..7123
DNA (1251bp) protein (417aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=1 Tax=Clostridium sp. CAG:221 RepID=R6G0N4_9CLOT rbh
phosphoribosylamine--glycine ligase
NECEvent2014_5_2_scaffold_286_8
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7525..8247)
DNA (723bp) protein (241aa)
UPI0003B33DC5 related cluster n=1 Tax=unknown RepID=UPI0003B33DC5
Transcriptional regulator {ECO:0000313|EMBL:EXG86843.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
GntR family transcriptional regulator
NECEvent2014_5_2_scaffold_286_9
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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8397..9140
DNA (744bp) protein (248aa)
N-acylglucosamine-6-phosphate 2-epimerase {ECO:0000256|SAAS:SAAS00074327}; EC=5.1.3.9 {ECO:0000256|SAAS:SAAS00074327};; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae;
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9H9F7_9FUSO
N-acetylmannosamine-6-phosphate 2-epimerase
NECEvent2014_5_2_scaffold_286_10
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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9224..10762
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AIJ6_SEBTE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ08580.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 /
NECEvent2014_5_2_scaffold_286_11
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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10800..12386
DNA (1587bp) protein (529aa)
Putative PTS system maltose-and glucose-specific EIICB component n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAQ3_FUSMR rbh
Putative PTS system maltose-and glucose-specific EIICB component {ECO:0000313|EMBL:EEO34940.1}; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source
PTS system glucose-like transporter subunit IIB
NECEvent2014_5_2_scaffold_286_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12474..12944
DNA (471bp) protein (157aa)
PTS system, glucose subfamily, IIA subunit n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LZV5_CLOB8
PTS system, glucose subfamily, IIA subunit
PTS system, glucose subfamily, IIA subunit {ECO:0000313|EMBL:ABR35885.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beij
NECEvent2014_5_2_scaffold_286_13
unknown

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12957..13496
DNA (540bp) protein (180aa)

This feature has no annotations

NECEvent2014_5_2_scaffold_286_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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13516..14877
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I9R3_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHI61802.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
sulfatase
NECEvent2014_5_2_scaffold_286_15
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

14969..15736
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PWI3_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO79514.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
Predicted permeases
Displaying 15 items

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