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NECEvent2014_5_2_scaffold_58_46

Organism: NECEvent2014_5_2_Clostridium_paraputrificum-rel_30_55

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(44279..44923)

Top 3 Functional Annotations

Value Algorithm Source
Capsular polysaccharide biosynthesis protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SVR8_CLOPS similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 212.0
  • Bit_score: 213
  • Evalue 2.10e-52
capsular polysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 212.0
  • Bit_score: 213
  • Evalue 5.80e-53
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDT27904.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 212.0
  • Bit_score: 213
  • Evalue 2.90e-52

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 645
GTGAAGAATATTCTAGAGAATCCTACAACGATATATGCGGAAGCGTATAGTAAGCTTAAAACAAGTATTAAGTATTCATCTGCAGATAAAAATAACAAAGTATTTCTTATAACATCATCAGAAAAAGGTGAGGGTAAATCAACAACAGCGACAAACCTAGCAATAAGCTTATCTTTTGATAAGAAAAAAGTTTTGCTTGTAGATTGCGACTTGAGAAGACCTTCTTTACATAAGTATTTAAGGATTAGTGGAGAATGTGGATTAACAGAAGTAATAATAGGGGAAACAAACGTAGAAAAAGCAATAGTTAATATAAAGGATAATCTATTTTTTTTACCTTCAGGAAATAGACCACCAAATCCTGCAGAGCTATTGGGAAGTGAAAATTTTGAATTAATGTTAAAGGAACTAAAGGATATATTTGATTATATTATAATTGATTCCCCACCTCTTAGGGTAGTGGCTGACGCACAAATTCTAAGTTCGAAAGTAGACGGAGTTATATTGGTGGTGAAATATGGGTTTACAAAGAAAGATGAACTTTTAGTATGTAGAGAAACTTTAGAATTAGTTGGCGGTAAGTTAATTGGAACAGTTATAAATGGGGACAAGAAAGAGAATGATTACAAGTATTACTATTATTAA
PROTEIN sequence
Length: 215
VKNILENPTTIYAEAYSKLKTSIKYSSADKNNKVFLITSSEKGEGKSTTATNLAISLSFDKKKVLLVDCDLRRPSLHKYLRISGECGLTEVIIGETNVEKAIVNIKDNLFFLPSGNRPPNPAELLGSENFELMLKELKDIFDYIIIDSPPLRVVADAQILSSKVDGVILVVKYGFTKKDELLVCRETLELVGGKLIGTVINGDKKENDYKYYYY*