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NECEvent2014_5_2_scaffold_58_47

Organism: NECEvent2014_5_2_Clostridium_paraputrificum-rel_30_55

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(44874..45683)

Top 3 Functional Annotations

Value Algorithm Source
Capsule chain length determinant protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SVR9_CLOPS similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 232.0
  • Bit_score: 213
  • Evalue 2.00e-52
chain length determinant protein similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 232.0
  • Bit_score: 212
  • Evalue 1.20e-52
Capsule chain length determinant protein {ECO:0000313|EMBL:ABG87233.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 232.0
  • Bit_score: 212
  • Evalue 6.20e-52

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 810
TTGGAAAGTGAAGAGGTATCAATTAAAGAAGTTCTAGAAACCTTGAAAAGAAGATGGAAGATGATCGCTATTATCGTATTAGTATGTCTAATTGTGGCTTCTGTATATAGCTTTTTTATAACTAAACCTGTATATAAAATAAGTACAAAGTTATTTATAGGTAAAGAAGTAAGCGACGGGGCATCAGATTACAATAGTAGCGAAGTTCAGATGTATCAAAAACTAATGAAAACATATGCTGGAATTGCAAAATCAGATGATGTAATTCAAAGAGCACTAGATAGAGGAGATAGTAATGCTAGTGCAAAGTCTATTTTATCTAACCTAGAAGTAATAGCCGGAAATGATGACCAGTTTTTGACCATATCATTAAGTACTAAAGAACCAGGAGAGGGCTTAAAGGTATTAAATAATATTATTGATGAGTTTATAGAAACATCATCAAAGATATATGCCAATGGTAATGTTAGTATAGTAACAACACCTAAATATCCTGAATCAGCAATTAGCCCTAATAAGAAACTAAATATAGCTATTACATTTATGATAGGAGTAATGTGTTCTGTAGGTTTAGCATTATTGTTAGAATTTATGTATAACACTGCAAAGAGCAAGGAAGAAATAGAAGAAATACTAGGAGTATCTGTTTTAGGAATTTTACCTGAATATACAGATGAAGATAAGTTAGATGATTTTAAGAGTAAAAGGATTTTGGGAAATAAACATCTAAGAAATAAAAAAAGAAGGAGGAAAAATAAGGGTGAAGAATATTCTAGAGAATCCTACAACGATATATGCGGAAGCGTATAG
PROTEIN sequence
Length: 270
LESEEVSIKEVLETLKRRWKMIAIIVLVCLIVASVYSFFITKPVYKISTKLFIGKEVSDGASDYNSSEVQMYQKLMKTYAGIAKSDDVIQRALDRGDSNASAKSILSNLEVIAGNDDQFLTISLSTKEPGEGLKVLNNIIDEFIETSSKIYANGNVSIVTTPKYPESAISPNKKLNIAITFMIGVMCSVGLALLLEFMYNTAKSKEEIEEILGVSVLGILPEYTDEDKLDDFKSKRILGNKHLRNKKRRRKNKGEEYSRESYNDICGSV*