ggKbase home page

NECEvent2014_5_2_scaffold_172_14

Organism: NECEvent2014_5_2_Clostridium_paraputrificum-rel_30_55

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 14426..15754

Top 3 Functional Annotations

Value Algorithm Source
PTS system cellobiose-specific transporter subunit IIC (EC:2.7.1.69) similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 443.0
  • Bit_score: 649
  • Evalue 8.50e-184
PTS system protein n=8 Tax=Clostridium clostridioforme RepID=G5I432_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 444.0
  • Bit_score: 653
  • Evalue 2.10e-184
  • rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 444.0
  • Bit_score: 653
  • Evalue 2.90e-184

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] clostridioforme → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1329
ATGTTAGATAAATTAGAATCAATTTTTATGCCACTTGCTGAAAAGATTGGGAAAAATAAATACTTAATTTCTATTAGAGATGGATTTTTACTTACAACACCTTTATTAATTATAGGATCATTCTTCTTACTTATTGCAAACTTCCCAATTAATAATTGGACAGAATTTTGGGCAAGATTTTTTGGAGAAAATTGGACAGCCTATATGGCTAAACCAACAAGTGCAACATTTGATATTATGGCTATCTTAGCTGTAGTTGGAATTGCATATTCTTTTTCAAGAGAATTAAATGTAGATAAATTATCAGGAGCTGCTGTAGCTGTAGTATCATGGTTTATATTAATGCCATATAAAGTTACAGATGGAAGTGTAACATTAAATGGAATTCCATTAGATTGGGTTGGTTCTAAAGGAATATTCATAGGAATAATAACTGCATTTGTATCAGTTCATATATACGCATGGGTAATTAAAAAAGGATGGATAATTAAAATGCCTAAAGGTGTTCCACCAGCAGTTACTCAATCATTTGCAGCGTTAGTTCCTTCAGCAGTAGTACTTGGAGTATTCTTTTTAGCTAATAGTTTAATAGCAATTACACCATATGATAATGCATTTAATTTTATATTTAAATTTTTACAACAACCACTTCTAGTGTTAGGAAATACATTAGGTGCAGTATTAGTTGCAATGGGATTCCAACATTTCTTCTGGTTCTTTGGAATAAATGGAGGTTCTATTGTTGGTAGTATAATGCAGCCTATATTAACACCGCTTTCAATGGAAAATTTATCAGCATTCCAAGCAGGAACTGCACTTCCAAATGTAATAAATCAACAGTTCTATGACTTGTTCACTACATTTGGAGGAGCTGGATCAACATTATCTATGTTAATTGCAATGATTATTGTATGTAGATCACAACGTATTAAAAACTTAAGTAAGATTTCAATTGTACCTGCATTATTTGGAATAAATGAACCTGTTATATTTGGATTACCTGTAGTATTAAATCCAACAATTTTAATTCCATTTTTATTAACACCACTTATAAATATTTTAATATCATATTTTTCAATGGTTAGTGGACTAGTTCCATTTACTAGCGGAGTAAGTATGCCATGGACAACTCCTGTTATTATATCTGGATTTTTAACAACTGGCTGGAGAGGAGCACTTCTTCAATTAATTCTTGTAATTTTAGGTGTATTCATTTATATGCCATTTGTAAAGATGATGGATAAGCAATATAAAAAGGAAGAATTACAGGCAAGTGAAAGCTCAGATGATGATATCTCTCTTGATGATTTATCATTTGACGATTTATAG
PROTEIN sequence
Length: 443
MLDKLESIFMPLAEKIGKNKYLISIRDGFLLTTPLLIIGSFFLLIANFPINNWTEFWARFFGENWTAYMAKPTSATFDIMAILAVVGIAYSFSRELNVDKLSGAAVAVVSWFILMPYKVTDGSVTLNGIPLDWVGSKGIFIGIITAFVSVHIYAWVIKKGWIIKMPKGVPPAVTQSFAALVPSAVVLGVFFLANSLIAITPYDNAFNFIFKFLQQPLLVLGNTLGAVLVAMGFQHFFWFFGINGGSIVGSIMQPILTPLSMENLSAFQAGTALPNVINQQFYDLFTTFGGAGSTLSMLIAMIIVCRSQRIKNLSKISIVPALFGINEPVIFGLPVVLNPTILIPFLLTPLINILISYFSMVSGLVPFTSGVSMPWTTPVIISGFLTTGWRGALLQLILVILGVFIYMPFVKMMDKQYKKEELQASESSDDDISLDDLSFDDL*