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NECEvent2014_5_2_scaffold_172

Alias: 175_001_scaffold_172

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_2_scaffold_172_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

250..534
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BYG0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13268.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
Mor transcription activator family.
NECEvent2014_5_2_scaffold_172_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

538..996
DNA (459bp) protein (153aa)
TM2 domain containing protein+B7201 n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BYG1_CLOPF rbh
TM2 domain containing protein+B7201 {ECO:0000313|EMBL:EDT13261.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
TM2 domain-containing protein
NECEvent2014_5_2_scaffold_172_3
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1594..4140
DNA (2547bp) protein (849aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BYG2_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:KEZ85251.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
NECEvent2014_5_2_scaffold_172_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4159..4311
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BYG3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13266.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_5_2_scaffold_172_5
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4358..4771
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXA1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:KEZ85252.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
NECEvent2014_5_2_scaffold_172_6
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4911..6608
DNA (1698bp) protein (566aa)
Cassette chromosome recombinase B n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXA0_CLOPF rbh
Resolvase {ECO:0000313|EMBL:KEZ85253.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
DNA recombinase
NECEvent2014_5_2_scaffold_172_7
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6671..7213
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0E2S4_CLOSO
Uncharacterized protein {ECO:0000313|EMBL:KEZ85254.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
NECEvent2014_5_2_scaffold_172_8
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7243..7494
DNA (252bp) protein (84aa)
Uncharacterized protein n=3 Tax=Clostridium acetobutylicum RepID=Q97DE7_CLOAB
Uncharacterized protein {ECO:0000313|EMBL:KEZ85255.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
NECEvent2014_5_2_scaffold_172_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7742..8773
DNA (1032bp) protein (344aa)
Transcriptional regulator, XRE family n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MY72_CLOSA rbh
transcriptional regulator, XRE family
Transcriptional regulator, XRE family {ECO:0000313|EMBL:AGX44392.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharo
NECEvent2014_5_2_scaffold_172_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8910..9749)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YR91_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91092.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
lactose operon transcriptional activator
NECEvent2014_5_2_scaffold_172_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9932..12955
DNA (3024bp) protein (1008aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ADA9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91053.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
bgaL; beta-galactosidase
NECEvent2014_5_2_scaffold_172_12
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12970..14067
DNA (1098bp) protein (366aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R406_CLOSW rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL03119.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040
NECEvent2014_5_2_scaffold_172_13
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14086..14406
DNA (321bp) protein (107aa)
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9R0_CLOSW
PTS system lactose/cellobiose-specific transporter subunit IIB
Phosphotransferase system lactose/cellobiose-specific IIB subunit {ECO:0000313|EMBL:ADL04110.1}; Flags: Precursor;; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospirace
NECEvent2014_5_2_scaffold_172_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14426..15754
DNA (1329bp) protein (443aa)
PTS system cellobiose-specific transporter subunit IIC (EC:2.7.1.69)
PTS system protein n=8 Tax=Clostridium clostridioforme RepID=G5I432_9CLOT rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
NECEvent2014_5_2_scaffold_172_15
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15770..16267
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HM47_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97555.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
NECEvent2014_5_2_scaffold_172_16
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16406..16624)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NLL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK29756.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein DUF2922
NECEvent2014_5_2_scaffold_172_17
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16668..16898)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LW65_9CLOT
hypothetical protein DUF1659
Uncharacterized protein {ECO:0000313|EMBL:AGF57430.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
NECEvent2014_5_2_scaffold_172_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17052..17453
DNA (402bp) protein (134aa)
Conserved protein n=2 Tax=Clostridium tetani RepID=Q895W5_CLOTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84710.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_5_2_scaffold_172_19
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17972..18133
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q1B3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EET84722.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
NECEvent2014_5_2_scaffold_172_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18181..18606)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003603402
Uncharacterized protein {ECO:0000313|EMBL:EES49924.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
hypothetical protein
NECEvent2014_5_2_scaffold_172_21
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19339..19842)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Paenibacillus RepID=UPI00030AE290
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJK28330.1}; TaxID=1406 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (Bacillus polymy
NECEvent2014_5_2_scaffold_172_22
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19927..20112
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BNS5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHO81769.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
NECEvent2014_5_2_scaffold_172_23
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20109..21080
DNA (972bp) protein (324aa)
Conserved domain protein n=1 Tax=Turicibacter sp. HGF1 RepID=F0HC79_9FIRM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CQR55029.1}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus riograndensis SBR5.;"
NECEvent2014_5_2_scaffold_172_24
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21094..22047
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Paenibacillus sp. ICGEB2008 RepID=UPI0002E9430F rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY11554.1}; TaxID=1406 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (Bacillus polymy
NECEvent2014_5_2_scaffold_172_25
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22474..23109
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HBR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF01154.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
NECEvent2014_5_2_scaffold_172_26
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23161..23568
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SUJ3_CLOC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL52948.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain A
Displaying 26 items

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