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NECEvent2014_5_2_scaffold_230

Alias: 175_001_scaffold_230

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_2_scaffold_230_1
unknown

Not on your lists

comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

NECEvent2014_5_2_scaffold_230_2
Actinomyces sp. oral taxon 175, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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71..973
DNA (903bp) protein (301aa)
N-6 DNA methylase (EC:2.1.1.72)
N-6 DNA Methylase n=1 Tax=Actinomyces sp. oral taxon 175 str. F0384 RepID=F9PHQ3_9ACTO rbh
N-6 DNA Methylase {ECO:0000313|EMBL:EGV13731.1}; TaxID=944560 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 175 str. F0384.;"
NECEvent2014_5_2_scaffold_230_3
Corynebacterium resistens, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

970..2232
DNA (1263bp) protein (421aa)
hsdS; type I restriction enzyme S protein (EC:3.1.21.3) rbh
Type I restriction enzyme S protein {ECO:0000313|EMBL:AEI09871.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AEI09871.1};; TaxID=662755 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Co
Type I restriction enzyme S protein n=1 Tax=Corynebacterium resistens (strain DSM 45100 / JCM 12819 / GTC 2026) RepID=F8DZV7_CORRG rbh
NECEvent2014_5_2_scaffold_230_4
Actinomyces sp. oral taxon 175, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2229..5555
DNA (3327bp) protein (1109aa)
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EGV14866.1}; EC=3.1.21.3 {ECO:0000313|EMBL:EGV14866.1};; TaxID=944560 species="Bacteria; Actinobacteria; Actinomycetales; Actinomy
HsdR family type I site-specific deoxyribonuclease (EC:3.1.21.3)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Actinomyces sp. oral taxon 175 str. F0384 RepID=F9PHQ5_9ACTO rbh
NECEvent2014_5_2_scaffold_230_5
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5806..8016
DNA (2211bp) protein (737aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BCD4_9MICO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY02949.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
NECEvent2014_5_2_scaffold_230_6
unknown

Not on your lists

comp(7852..8340)
DNA (489bp) protein (163aa)

This feature has no annotations

NECEvent2014_5_2_scaffold_230_7
Actinomyces sp. oral taxon 448, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8672..9688
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EEQ1_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EGQ74551.1}; TaxID=888056 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 448 str. F04
hypothetical protein
NECEvent2014_5_2_scaffold_230_8
Actinomyces sp. oral taxon 448, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9773..11326
DNA (1554bp) protein (518aa)
Ribose ABC superfamily ATP binding cassette transporter, ABC protein {ECO:0000313|EMBL:EGQ74552.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EGQ74552.1};; TaxID=888056 species="Bacteria; Actinobacteria; Actinomy
ribose transport system ATP-binding protein (EC:3.6.3.17)
Ribose ABC superfamily ATP binding cassette transporter, ABC protein n=1 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EEQ2_9ACTO rbh
NECEvent2014_5_2_scaffold_230_9
Actinomyces sp. oral taxon 448, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11316..12320
DNA (1005bp) protein (335aa)
Sugar ABC superfamily ATP binding cassette transporter, ABC protein {ECO:0000313|EMBL:EGQ74553.1}; EC=3.6.3.- {ECO:0000313|EMBL:EGQ74553.1};; TaxID=888056 species="Bacteria; Actinobacteria; Actinomyce
Sugar ABC superfamily ATP binding cassette transporter, ABC protein n=1 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EEQ3_9ACTO rbh
monosaccharide ABC transporter permease
NECEvent2014_5_2_scaffold_230_10
Actinomyces sp. oral taxon 448, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12317..13390
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EEQ4_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EGQ74554.1}; TaxID=888056 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 448 str. F04
ABC transporter permease
NECEvent2014_5_2_scaffold_230_11
Actinomyces sp. oral taxon 448, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13524..14405
DNA (882bp) protein (294aa)
LacI family transcriptional regulator n=1 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EEQ5_9ACTO
LacI family transcriptional regulator {ECO:0000313|EMBL:EGQ74555.1}; TaxID=888056 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxo
LacI family transcriptional regulator
NECEvent2014_5_2_scaffold_230_12
Actinomyces sp. oral taxon 448, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14423..15376
DNA (954bp) protein (318aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EEQ6_9ACTO rbh
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:EGQ74556.1}; TaxID=888056 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon
sugar phosphate isomerase/epimerase
NECEvent2014_5_2_scaffold_230_13
Actinobaculum sp. oral taxon 183, Actinobaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15378..16079
DNA (702bp) protein (234aa)
Putative L-ribulose-5-phosphate 4-epimerase n=1 Tax=Actinobaculum sp. oral taxon 183 str. F0552 RepID=U1QA77_9ACTO rbh
Putative L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:ERH18889.1}; TaxID=1227261 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinobaculum.;" source="Actinobaculum sp
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase
NECEvent2014_5_2_scaffold_230_14
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16110..17717
DNA (1608bp) protein (536aa)
Carbohydrate kinase, FGGY-domain n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EQQ0_MODMB rbh
ATPase {ECO:0000313|EMBL:EYR64117.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
carbohydrate kinase, FGGY-domain
NECEvent2014_5_2_scaffold_230_15
unknown

Not on your lists

17793..18152
DNA (360bp) protein (120aa)

This feature has no annotations

NECEvent2014_5_2_scaffold_230_16
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18431..18769
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WWD9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH01412.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HG
hypothetical protein
Displaying 16 items

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