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NECEvent2014_5_2_Propionibacterium_HGH0353-rel_63_29

NECEvent2014_5_2_Propionibacterium_sp__HGH0353_63_29
In projects: NECEvent2014_5_2

Consensus taxonomy: Propionibacterium sp. HGH0353  →  Propionibacterium  →  Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 201-250 of 695 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_2_scaffold_2534 175_001_scaffold_2534
Genus: Propionibacterium (100%)
3 2194 bp 66.64 24.20 99.95
NECEvent2014_5_2_scaffold_671 175_001_scaffold_671
Genus: Propionibacterium (85.71%)
7 6635 bp 61.42 24.26 90.93
NECEvent2014_5_2_scaffold_7039 175_001_scaffold_7039
Species: Propionibacterium sp. HGH0353 (66.67%)
3 1012 bp 66.80 24.31 81.23
NECEvent2014_5_2_scaffold_1734 175_001_scaffold_1734
Genus: Propionibacterium (100%)
4 2940 bp 64.90 24.44 86.63
NECEvent2014_5_2_scaffold_3540 175_001_scaffold_3540
Species: Propionibacterium sp. HGH0353 (80%)
5 1723 bp 68.66 24.55 93.21
NECEvent2014_5_2_scaffold_2446 175_001_scaffold_2446
Species: Propionibacterium sp. HGH0353 (50%)
2 2246 bp 66.61 24.58 100.05
NECEvent2014_5_2_scaffold_5236 175_001_scaffold_5236
Phylum: Actinobacteria (50%)
4 1289 bp 61.44 24.79 79.36
NECEvent2014_5_2_scaffold_1266 175_001_scaffold_1266
Species: Propionibacterium sp. HGH0353 (100%)
3 3682 bp 69.96 25.10 99.00
NECEvent2014_5_2_scaffold_3175 175_001_scaffold_3175
Species: Propionibacterium sp. KPL1852 (50%)
4 1862 bp 60.69 25.21 50.59
NECEvent2014_5_2_scaffold_1116 175_001_scaffold_1116
Species: Propionibacterium sp. HGH0353 (75%)
4 4066 bp 61.12 25.23 88.76
NECEvent2014_5_2_scaffold_1702 175_001_scaffold_1702
Species: Propionibacterium sp. HGH0353 (66.67%)
3 2983 bp 64.30 25.29 100.87
NECEvent2014_5_2_scaffold_1442 175_001_scaffold_1442
Species: Propionibacterium sp. HGH0353 (66.67%)
3 3361 bp 61.74 25.30 95.51
NECEvent2014_5_2_scaffold_1693 175_001_scaffold_1693
Species: Propionibacterium avidum (50%)
4 2993 bp 58.64 25.36 91.01
NECEvent2014_5_2_scaffold_6407 175_001_scaffold_6407
Genus: Propionibacterium (100%)
3 1094 bp 61.33 25.37 65.27
NECEvent2014_5_2_scaffold_5027 175_001_scaffold_5027
Species: Propionibacterium freudenreichii (100%)
1 1330 bp 68.95 25.38 71.28
NECEvent2014_5_2_scaffold_3238 175_001_scaffold_3238
Genus: Propionibacterium (100%)
3 1835 bp 61.74 25.42 84.69
NECEvent2014_5_2_scaffold_1513 175_001_scaffold_1513
Genus: Propionibacterium (100%)
3 3234 bp 61.41 25.42 82.93
NECEvent2014_5_2_scaffold_4686 175_001_scaffold_4686
Species: Propionibacterium sp. KPL1838 (50%)
2 1400 bp 60.93 25.50 95.79
NECEvent2014_5_2_scaffold_4703 175_001_scaffold_4703
Species: Propionibacterium sp. HGH0353 (50%)
2 1396 bp 58.17 25.57 95.85
NECEvent2014_5_2_scaffold_6567 175_001_scaffold_6567
Species: Propionibacterium sp. KPL1852 (66.67%)
3 1073 bp 66.73 25.58 43.62
NECEvent2014_5_2_scaffold_1137 175_001_scaffold_1137
Species: Propionibacterium sp. HGH0353 (80%)
5 4025 bp 62.96 25.68 88.55
NECEvent2014_5_2_scaffold_7091 175_001_scaffold_7091
Species: Propionibacterium sp. KPL1838 (100%)
1 1006 bp 63.92 25.80 92.74
NECEvent2014_5_2_scaffold_591 175_001_scaffold_591
Species: Propionibacterium sp. HGH0353 (75%)
8 7588 bp 62.59 25.82 93.82
NECEvent2014_5_2_scaffold_1589 175_001_scaffold_1589
Genus: Propionibacterium (100%)
3 3125 bp 62.46 26.06 75.46
NECEvent2014_5_2_scaffold_1814 175_001_scaffold_1814
Genus: Propionibacterium (100%)
5 2833 bp 56.62 26.26 84.08
NECEvent2014_5_2_scaffold_6555 175_001_scaffold_6555
Species: Propionibacterium avidum (50%)
2 1074 bp 63.04 26.40 89.94
NECEvent2014_5_2_scaffold_6980 175_001_scaffold_6980
Species: Propionibacterium sp. HGH0353 (100%)
1 1019 bp 60.26 26.50 90.09
NECEvent2014_5_2_scaffold_1916 175_001_scaffold_1916
Species: Propionibacterium avidum (100%)
3 2714 bp 62.68 26.58 93.07
NECEvent2014_5_2_scaffold_6652 175_001_scaffold_6652
Species: Propionibacterium sp. HGH0353 (100%)
1 1061 bp 65.98 26.72 99.81
NECEvent2014_5_2_scaffold_5141 175_001_scaffold_5141
Species: Propionibacterium sp. HGH0353 (100%)
1 1306 bp 68.61 26.76 89.13
NECEvent2014_5_2_scaffold_229 175_001_scaffold_229
Species: Propionibacterium sp. HGH0353 (70%)
20 18820 bp 66.12 26.78 86.45
NECEvent2014_5_2_scaffold_951 175_001_scaffold_951
Species: Propionibacterium sp. HGH0353 (50%)
4 4670 bp 65.16 26.88 82.61
NECEvent2014_5_2_scaffold_5621 175_001_scaffold_5621
Species: Propionibacterium sp. HGH0353 (50%)
2 1222 bp 64.73 26.88 93.78
NECEvent2014_5_2_scaffold_3436 175_001_scaffold_3436
Species: Propionibacterium sp. KPL1852 (66.67%)
3 1760 bp 66.36 26.93 94.26
NECEvent2014_5_2_scaffold_6875 175_001_scaffold_6875
Species: Propionibacterium avidum (50%)
2 1033 bp 59.54 27.01 98.16
NECEvent2014_5_2_scaffold_2025 175_001_scaffold_2025
Species: Propionibacterium sp. HGH0353 (100%)
3 2593 bp 64.87 27.02 100.42
NECEvent2014_5_2_scaffold_590 175_001_scaffold_590
Species: Propionibacterium sp. HGH0353 (80%)
5 7591 bp 60.41 27.05 65.21
NECEvent2014_5_2_scaffold_1556 175_001_scaffold_1556
Genus: Propionibacterium (83.33%)
6 3174 bp 55.01 27.08 52.08
NECEvent2014_5_2_scaffold_4560 175_001_scaffold_4560
Species: Propionibacterium sp. HGH0353 (100%)
1 1427 bp 61.95 27.12 99.86
NECEvent2014_5_2_scaffold_6858 175_001_scaffold_6858
Genus: Propionibacterium (66.67%)
3 1035 bp 60.29 27.25 77.68
NECEvent2014_5_2_scaffold_6169 175_001_scaffold_6169
Species: Propionibacterium sp. HGH0353 (100%)
2 1131 bp 63.57 27.32 104.24
NECEvent2014_5_2_scaffold_1731 175_001_scaffold_1731
Species: Propionibacterium sp. HGH0353 (100%)
3 2942 bp 60.16 27.33 80.05
NECEvent2014_5_2_scaffold_740 175_001_scaffold_740
Species: Propionibacterium sp. HGH0353 (100%)
5 5995 bp 64.42 27.35 99.68
NECEvent2014_5_2_scaffold_3224 175_001_scaffold_3224
Species: Propionibacterium sp. HGH0353 (100%)
1 1842 bp 60.48 27.36 99.84
NECEvent2014_5_2_scaffold_4630 175_001_scaffold_4630
Species: Propionibacterium sp. HGH0353 (100%)
2 1411 bp 64.35 27.43 94.83
NECEvent2014_5_2_scaffold_6593 175_001_scaffold_6593
Species: Propionibacterium sp. HGH0353 (100%)
3 1068 bp 61.70 27.53 98.03
NECEvent2014_5_2_scaffold_3939 175_001_scaffold_3939
Species: Propionibacterium sp. HGH0353 (50%)
2 1594 bp 61.98 27.57 48.75
NECEvent2014_5_2_scaffold_6374 175_001_scaffold_6374
Species: Propionibacterium sp. HGH0353 (100%)
1 1098 bp 65.85 27.60 100.00
NECEvent2014_5_2_scaffold_3206 175_001_scaffold_3206
Species: Propionibacterium avidum (66.67%)
3 1848 bp 63.42 27.60 80.19
NECEvent2014_5_2_scaffold_1573 175_001_scaffold_1573
Species: Propionibacterium sp. HGH0353 (100%)
3 3150 bp 62.86 27.67 88.00
Displaying items 201-250 of 695 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.