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NECEvent2014_5_2_Propionibacterium_HGH0353-rel_63_29

NECEvent2014_5_2_Propionibacterium_sp__HGH0353_63_29
In projects: NECEvent2014_5_2

Consensus taxonomy: Propionibacterium sp. HGH0353  →  Propionibacterium  →  Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 151-200 of 695 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_2_scaffold_625 175_001_scaffold_625
Species: Propionibacterium sp. KPL1838 (66.67%)
6 7118 bp 61.69 19.35 94.49
NECEvent2014_5_2_scaffold_5110 175_001_scaffold_5110
Species: Propionibacterium avidum (100%)
1 1312 bp 62.27 19.44 99.92
NECEvent2014_5_2_scaffold_264 175_001_scaffold_264
Genus: Propionibacterium (72.22%)
18 16860 bp 63.01 19.48 75.87
NECEvent2014_5_2_scaffold_4721 175_001_scaffold_4721
Species: Propionibacterium sp. HGH0353 (100%)
1 1392 bp 64.80 19.50 82.97
NECEvent2014_5_2_scaffold_1624 175_001_scaffold_1624
Species: Beutenbergia cavernae (50%)
4 3079 bp 59.47 19.58 86.62
NECEvent2014_5_2_scaffold_1745 175_001_scaffold_1745
Genus: Propionibacterium (66.67%)
6 2917 bp 60.27 19.59 78.27
NECEvent2014_5_2_scaffold_5416 175_001_scaffold_5416
Species: Propionibacterium sp. HGH0353 (100%)
1 1255 bp 66.06 19.60 99.92
NECEvent2014_5_2_scaffold_3622 175_001_scaffold_3622
Species: Propionibacterium sp. HGH0353 (100%)
1 1697 bp 65.41 19.71 99.88
NECEvent2014_5_2_scaffold_3531 175_001_scaffold_3531
Species: Propionibacterium sp. KPL2005 (50%)
2 1725 bp 62.43 19.74 91.65
NECEvent2014_5_2_scaffold_213 175_001_scaffold_213
Genus: Propionibacterium (100%)
24 19763 bp 62.59 19.79 94.46
NECEvent2014_5_2_scaffold_1051 175_001_scaffold_1051
Genus: Propionibacterium (100%)
5 4263 bp 54.42 19.81 81.42
NECEvent2014_5_2_scaffold_2050 175_001_scaffold_2050
Species: Propionibacterium sp. HGH0353 (66.67%)
3 2559 bp 64.01 19.93 95.31
NECEvent2014_5_2_scaffold_540 175_001_scaffold_540
Species: Propionibacterium sp. HGH0353 (100%)
11 8306 bp 62.38 20.05 87.52
NECEvent2014_5_2_scaffold_903 175_001_scaffold_903
Species: Propionibacterium avidum (60%)
5 4887 bp 64.29 20.29 100.43
NECEvent2014_5_2_scaffold_7026 175_001_scaffold_7026
Species: Propionibacterium sp. HGH0353 (100%)
1 1012 bp 61.66 20.31 99.90
NECEvent2014_5_2_scaffold_1033 175_001_scaffold_1033
Species: Propionibacterium sp. KPL1852 (50%)
4 4336 bp 61.39 20.34 77.01
NECEvent2014_5_2_scaffold_1348 175_001_scaffold_1348
Genus: Propionibacterium (100%)
3 3512 bp 61.33 20.46 88.75
NECEvent2014_5_2_scaffold_1637 175_001_scaffold_1637
Species: Propionibacterium sp. HGH0353 (66.67%)
3 3067 bp 56.67 20.59 80.70
NECEvent2014_5_2_scaffold_778 175_001_scaffold_778
Species: Propionibacterium sp. HGH0353 (80%)
5 5644 bp 58.40 20.89 67.82
NECEvent2014_5_2_scaffold_3250 175_001_scaffold_3250
Species: Propionibacterium sp. HGH0353 (50%)
2 1831 bp 62.75 21.05 82.09
NECEvent2014_5_2_scaffold_6008 175_001_scaffold_6008
Species: Propionibacterium sp. HGH0353 (50%)
2 1154 bp 60.23 21.19 84.23
NECEvent2014_5_2_scaffold_426 175_001_scaffold_426
Species: Dermabacter hominis (50%)
12 10211 bp 66.13 21.34 94.01
NECEvent2014_5_2_scaffold_928 175_001_scaffold_928
Species: Propionibacterium sp. HGH0353 (100%)
4 4781 bp 60.97 21.43 89.48
NECEvent2014_5_2_scaffold_219 175_001_scaffold_219
Genus: Propionibacterium (100%)
8 19470 bp 61.98 21.43 93.96
NECEvent2014_5_2_scaffold_3427 175_001_scaffold_3427
Species: Propionibacterium sp. HGH0353 (75%)
4 1762 bp 60.73 21.45 83.60
NECEvent2014_5_2_scaffold_7103 175_001_scaffold_7103
Species: Propionibacterium sp. KPL1852 (50%)
2 1005 bp 64.98 21.64 94.33
NECEvent2014_5_2_scaffold_734 175_001_scaffold_734
Species: Propionibacterium sp. HGH0353 (100%)
5 6059 bp 64.61 21.69 99.67
NECEvent2014_5_2_scaffold_2077 175_001_scaffold_2077
Species: Propionibacterium sp. DORA_15 (60%)
5 2541 bp 53.84 21.84 91.03
NECEvent2014_5_2_scaffold_2270 175_001_scaffold_2270
Species: Propionibacterium sp. HGH0353 (100%)
1 2375 bp 60.84 21.92 72.51
NECEvent2014_5_2_scaffold_3858 175_001_scaffold_3858
Species: Propionibacterium sp. HGH0353 (100%)
2 1620 bp 62.41 22.22 87.41
NECEvent2014_5_2_scaffold_1120 175_001_scaffold_1120
Species: Propionibacterium sp. HGH0353 (50%)
4 4060 bp 59.83 22.28 86.03
NECEvent2014_5_2_scaffold_6122 175_001_scaffold_6122
Species: Propionibacterium sp. KPL1838 (50%)
2 1136 bp 62.68 22.45 77.90
NECEvent2014_5_2_scaffold_953 175_001_scaffold_953
Genus: Propionibacterium (100%)
3 4665 bp 60.75 22.70 67.46
NECEvent2014_5_2_scaffold_2885 175_001_scaffold_2885
Species: Propionibacterium avidum (50%)
2 1988 bp 66.65 22.71 100.35
NECEvent2014_5_2_scaffold_2563 175_001_scaffold_2563
Species: Propionibacterium sp. HGH0353 (100%)
1 2172 bp 65.15 22.79 100.00
NECEvent2014_5_2_scaffold_920 175_001_scaffold_920
Genus: Propionibacterium (100%)
7 4822 bp 60.56 22.99 93.01
NECEvent2014_5_2_scaffold_3195 175_001_scaffold_3195
Species: Propionibacterium sp. HGH0353 (100%)
2 1852 bp 61.50 23.00 58.96
NECEvent2014_5_2_scaffold_2008 175_001_scaffold_2008
Species: Propionibacterium avidum (50%)
4 2607 bp 63.25 23.07 93.79
NECEvent2014_5_2_scaffold_6034 175_001_scaffold_6034
Species: Propionibacterium sp. KPL1852 (50%)
2 1151 bp 63.42 23.07 77.41
NECEvent2014_5_2_scaffold_358 175_001_scaffold_358
Species: Propionibacterium sp. KPL1852 (63.64%)
11 12476 bp 62.72 23.19 89.31
NECEvent2014_5_2_scaffold_576 175_001_scaffold_576
Species: Propionibacterium sp. HGH0353 (71.43%)
7 7757 bp 60.23 23.57 89.69
NECEvent2014_5_2_scaffold_2686 175_001_scaffold_2686
Species: Propionibacterium sp. HGH0353 (100%)
1 2107 bp 59.75 23.64 48.41
NECEvent2014_5_2_scaffold_3397 175_001_scaffold_3397
Class: Actinobacteria (66.67%)
3 1776 bp 59.23 23.65 61.26
NECEvent2014_5_2_scaffold_702 175_001_scaffold_702
Species: Propionibacterium sp. HGH0353 (62.5%)
8 6332 bp 54.66 23.67 86.23
NECEvent2014_5_2_scaffold_6490 175_001_scaffold_6490
Species: Propionibacterium sp. HGH0353 (75%)
4 1083 bp 62.70 23.68 87.53
NECEvent2014_5_2_scaffold_1034 175_001_scaffold_1034
Genus: Propionibacterium (50%)
6 4335 bp 56.86 23.77 94.60
NECEvent2014_5_2_scaffold_1168 175_001_scaffold_1168
Species: Propionibacterium sp. HGH0353 (50%)
4 3937 bp 63.40 23.85 72.77
NECEvent2014_5_2_scaffold_3541 175_001_scaffold_3541
Species: Propionibacterium sp. KPL1838 (50%)
2 1723 bp 64.42 24.03 94.02
NECEvent2014_5_2_scaffold_809 175_001_scaffold_809
Species: Propionibacterium sp. HGH0353 (80%)
5 5427 bp 63.63 24.05 95.52
NECEvent2014_5_2_scaffold_5032 175_001_scaffold_5032
Species: Propionibacterium sp. HGH0353 (100%)
1 1329 bp 63.66 24.15 94.36
Displaying items 151-200 of 695 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.