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NECEvent2014_5_2_Propionibacterium_HGH0353-rel_63_29

NECEvent2014_5_2_Propionibacterium_sp__HGH0353_63_29
In projects: NECEvent2014_5_2

Consensus taxonomy: Propionibacterium sp. HGH0353  →  Propionibacterium  →  Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 51-100 of 695 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_2_scaffold_6836 175_001_scaffold_6836
Species: Propionibacterium avidum (100%)
1 1037 bp 61.33 13.45 99.81
NECEvent2014_5_2_scaffold_581 175_001_scaffold_581
Genus: Propionibacterium (85.71%)
7 7714 bp 61.47 13.53 74.75
NECEvent2014_5_2_scaffold_2187 175_001_scaffold_2187
Species: Propionibacterium avidum (50%)
2 2437 bp 65.82 13.66 81.86
NECEvent2014_5_2_scaffold_6449 175_001_scaffold_6449
Species: Propionibacterium sp. KPL2005 (50%)
2 1088 bp 64.43 13.79 99.82
NECEvent2014_5_2_scaffold_1837 175_001_scaffold_1837
Species: CG_Propioni_01 (50%)
4 2809 bp 62.76 13.83 96.76
NECEvent2014_5_2_scaffold_5693 175_001_scaffold_5693
Species: Propionibacterium sp. KPL1838 (50%)
2 1208 bp 55.55 13.91 91.39
NECEvent2014_5_2_scaffold_714 175_001_scaffold_714
Genus: Propionibacterium (66.67%)
9 6210 bp 57.89 13.91 84.52
NECEvent2014_5_2_scaffold_4095 175_001_scaffold_4095
Genus: Propionibacterium (100%)
3 1549 bp 64.04 13.94 89.67
NECEvent2014_5_2_scaffold_6093 175_001_scaffold_6093
Species: Propionibacterium sp. HGH0353 (100%)
3 1140 bp 65.88 13.95 100.00
NECEvent2014_5_2_scaffold_2432 175_001_scaffold_2432
Species: Propionibacterium avidum (50%)
2 2252 bp 61.55 13.99 79.53
NECEvent2014_5_2_scaffold_1018 175_001_scaffold_1018
Species: Propionibacterium humerusii (80%)
5 4403 bp 59.57 14.07 87.49
NECEvent2014_5_2_scaffold_6068 175_001_scaffold_6068
Genus: Propionibacterium (66.67%)
3 1146 bp 66.40 14.14 98.69
NECEvent2014_5_2_scaffold_656 175_001_scaffold_656
Genus: Propionibacterium (62.5%)
8 6821 bp 66.35 14.21 48.51
NECEvent2014_5_2_scaffold_1532 175_001_scaffold_1532
Species: Propionibacterium sp. HGH0353 (100%)
2 3214 bp 65.31 14.28 92.03
NECEvent2014_5_2_scaffold_1325 175_001_scaffold_1325
Genus: Propionibacterium (100%)
4 3575 bp 58.35 14.43 82.49
NECEvent2014_5_2_scaffold_5845 175_001_scaffold_5845
Species: Propionibacterium sp. HGH0353 (100%)
3 1183 bp 60.69 14.45 101.69
NECEvent2014_5_2_scaffold_6202 175_001_scaffold_6202
Species: Propionibacterium sp. HGH0353 (100%)
1 1127 bp 60.16 14.64 99.82
NECEvent2014_5_2_scaffold_7042 175_001_scaffold_7042
Species: Propionibacterium avidum (50%)
2 1011 bp 59.45 14.69 82.79
NECEvent2014_5_2_scaffold_5894 175_001_scaffold_5894
Species: Propionibacterium humerusii (50%)
2 1175 bp 62.64 14.81 93.45
NECEvent2014_5_2_scaffold_2841 175_001_scaffold_2841
Genus: Propionibacterium (100%)
3 2014 bp 58.24 14.97 85.95
NECEvent2014_5_2_scaffold_5814 175_001_scaffold_5814
Species: Propionibacterium avidum (66.67%)
3 1189 bp 62.66 15.01 97.65
NECEvent2014_5_2_scaffold_5895 175_001_scaffold_5895
Species: Propionibacterium avidum (100%)
2 1174 bp 63.12 15.08 81.52
NECEvent2014_5_2_scaffold_2080 175_001_scaffold_2080
Genus: Propionibacterium (100%)
3 2537 bp 64.49 15.08 90.11
NECEvent2014_5_2_scaffold_3621 175_001_scaffold_3621
Species: Propionibacterium avidum (100%)
1 1697 bp 65.88 15.11 99.88
NECEvent2014_5_2_scaffold_1159 175_001_scaffold_1159
Genus: Propionibacterium (100%)
3 3966 bp 62.68 15.13 99.39
NECEvent2014_5_2_scaffold_3438 175_001_scaffold_3438
Species: Propionibacterium sp. HGH0353 (100%)
2 1759 bp 59.92 15.18 73.51
NECEvent2014_5_2_scaffold_1948 175_001_scaffold_1948
Species: Propionibacterium acnes (50%)
2 2674 bp 60.36 15.20 90.76
NECEvent2014_5_2_scaffold_4875 175_001_scaffold_4875
Species: Propionibacterium sp. KPL1852 (100%)
1 1360 bp 64.71 15.22 84.93
NECEvent2014_5_2_scaffold_4430 175_001_scaffold_4430
Species: Propionibacterium granulosum (100%)
1 1459 bp 62.17 15.32 99.11
NECEvent2014_5_2_scaffold_6547 175_001_scaffold_6547
Species: Propionibacterium sp. HGH0353 (100%)
2 1076 bp 64.41 15.33 99.81
NECEvent2014_5_2_scaffold_692 175_001_scaffold_692
Species: Propionibacterium sp. KPL2005 (66.67%)
6 6453 bp 63.97 15.34 94.51
NECEvent2014_5_2_scaffold_1644 175_001_scaffold_1644
Species: Propionibacterium avidum (50%)
2 3061 bp 64.10 15.44 93.89
NECEvent2014_5_2_scaffold_2486 175_001_scaffold_2486
Species: Propionibacterium sp. HGH0353 (60%)
5 2223 bp 57.67 15.45 75.57
NECEvent2014_5_2_scaffold_5173 175_001_scaffold_5173
Species: Propionibacterium sp. KPL2005 (50%)
2 1299 bp 65.20 15.47 100.00
NECEvent2014_5_2_scaffold_2593 175_001_scaffold_2593
Species: Propionibacterium sp. HGH0353 (100%)
5 2155 bp 64.08 15.52 95.50
NECEvent2014_5_2_scaffold_5873 175_001_scaffold_5873
Species: Propionibacterium sp. KPL2005 (100%)
1 1178 bp 60.87 15.53 89.90
NECEvent2014_5_2_scaffold_5500 175_001_scaffold_5500
Genus: Propionibacterium (100%)
3 1244 bp 57.64 15.55 60.53
NECEvent2014_5_2_scaffold_646 175_001_scaffold_646
Genus: Propionibacterium (100%)
7 6924 bp 62.35 15.58 96.19
NECEvent2014_5_2_scaffold_2290 175_001_scaffold_2290
Species: Propionibacterium avidum (50%)
2 2357 bp 64.66 15.59 100.17
NECEvent2014_5_2_scaffold_2673 175_001_scaffold_2673
Genus: Propionibacterium (66.67%)
3 2112 bp 63.87 15.70 66.95
NECEvent2014_5_2_scaffold_3271 175_001_scaffold_3271
Species: Propionibacterium sp. HGH0353 (100%)
2 1819 bp 62.56 15.75 90.38
NECEvent2014_5_2_scaffold_5963 175_001_scaffold_5963
Species: Propionibacterium sp. HGH0353 (100%)
2 1162 bp 66.01 15.88 97.59
NECEvent2014_5_2_scaffold_2558 175_001_scaffold_2558
Species: Propionibacterium sp. HGH0353 (66.67%)
3 2178 bp 68.27 15.98 82.64
NECEvent2014_5_2_scaffold_2594 175_001_scaffold_2594
Genus: Propionibacterium (100%)
5 2155 bp 64.36 16.08 94.94
NECEvent2014_5_2_scaffold_3386 175_001_scaffold_3386
Species: Propionibacterium sp. KPL2005 (100%)
1 1781 bp 62.61 16.09 97.02
NECEvent2014_5_2_scaffold_3575 175_001_scaffold_3575
Species: Propionibacterium sp. KPL1852 (50%)
2 1712 bp 65.89 16.21 86.92
NECEvent2014_5_2_scaffold_1557 175_001_scaffold_1557
Species: Propionibacterium sp. KPL1852 (66.67%)
3 3172 bp 64.16 16.22 96.66
NECEvent2014_5_2_scaffold_2150 175_001_scaffold_2150
Species: Propionibacterium sp. HGH0353 (100%)
5 2473 bp 63.57 16.32 91.83
NECEvent2014_5_2_scaffold_393 175_001_scaffold_393
Class: Actinobacteria (58.82%)
17 11364 bp 65.21 16.37 100.40
NECEvent2014_5_2_scaffold_3027 175_001_scaffold_3027
Species: Propionibacterium sp. HGH0353 (80%)
5 1925 bp 61.97 16.52 75.43
Displaying items 51-100 of 695 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.