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NECEvent2014_5_2_Propionibacterium_HGH0353-rel_63_29

NECEvent2014_5_2_Propionibacterium_sp__HGH0353_63_29
In projects: NECEvent2014_5_2

Consensus taxonomy: Propionibacterium sp. HGH0353  →  Propionibacterium  →  Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 101-150 of 695 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_2_scaffold_6033 175_001_scaffold_6033
Species: Propionibacterium avidum (66.67%)
3 1151 bp 64.47 16.55 98.52
NECEvent2014_5_2_scaffold_3555 175_001_scaffold_3555
Species: Propionibacterium sp. KPL2005 (50%)
2 1718 bp 58.61 16.59 65.31
NECEvent2014_5_2_scaffold_2034 175_001_scaffold_2034
Species: Propionibacterium sp. KPL1852 (100%)
3 2575 bp 66.21 16.66 94.95
NECEvent2014_5_2_scaffold_3869 175_001_scaffold_3869
Species: Propionibacterium sp. KPL1852 (50%)
2 1618 bp 61.62 16.69 87.33
NECEvent2014_5_2_scaffold_705 175_001_scaffold_705
Genus: Propionibacterium (100%)
8 6276 bp 60.91 16.83 74.57
NECEvent2014_5_2_scaffold_1254 175_001_scaffold_1254
Genus: Propionibacterium (71.43%)
7 3705 bp 60.54 16.88 79.97
NECEvent2014_5_2_scaffold_5436 175_001_scaffold_5436
Species: Propionibacterium sp. KPL1852 (100%)
1 1252 bp 67.49 16.89 99.92
NECEvent2014_5_2_scaffold_6247 175_001_scaffold_6247
Species: Propionibacterium sp. HGH0353 (100%)
2 1118 bp 63.24 16.91 70.04
NECEvent2014_5_2_scaffold_3037 175_001_scaffold_3037
Species: Propionibacterium sp. KPL1852 (100%)
1 1921 bp 62.47 17.02 99.95
NECEvent2014_5_2_scaffold_6604 175_001_scaffold_6604
Genus: Propionibacterium (75%)
4 1067 bp 57.92 17.15 92.69
NECEvent2014_5_2_scaffold_2264 175_001_scaffold_2264
Genus: Propionibacterium (100%)
3 2378 bp 61.35 17.16 101.05
NECEvent2014_5_2_scaffold_3398 175_001_scaffold_3398
Species: Micrococcus luteus (100%)
1 1775 bp 61.58 17.24 70.48
NECEvent2014_5_2_scaffold_199 175_001_scaffold_199
Order: Micrococcales (66.67%)
18 20760 bp 64.97 17.39 92.88
NECEvent2014_5_2_scaffold_1578 175_001_scaffold_1578
Species: Propionibacterium sp. HGH0353 (100%)
4 3140 bp 67.48 17.39 81.88
NECEvent2014_5_2_scaffold_718 175_001_scaffold_718
Species: Dermabacter hominis (60%)
10 6179 bp 65.27 17.48 92.10
NECEvent2014_5_2_scaffold_372 175_001_scaffold_372
Species: Propionibacterium sp. HGH0353 (72.73%)
11 11871 bp 62.92 17.51 96.72
NECEvent2014_5_2_scaffold_2022 175_001_scaffold_2022
Species: Propionibacterium sp. KPL2005 (75%)
4 2594 bp 67.04 17.52 100.27
NECEvent2014_5_2_scaffold_1349 175_001_scaffold_1349
Genus: Propionibacterium (100%)
3 3511 bp 59.98 17.60 86.30
NECEvent2014_5_2_scaffold_5572 175_001_scaffold_5572
Species: Propionibacterium sp. HGH0353 (100%)
1 1231 bp 64.50 17.67 99.92
NECEvent2014_5_2_scaffold_3726 175_001_scaffold_3726
Species: Propionibacterium sp. HGH0353 (66.67%)
3 1660 bp 64.10 17.71 98.31
NECEvent2014_5_2_scaffold_6795 175_001_scaffold_6795
Species: Propionibacterium sp. KPL1838 (100%)
1 1042 bp 64.01 17.71 99.90
NECEvent2014_5_2_scaffold_398 175_001_scaffold_398
Species: Propionibacterium sp. HGH0353 (75%)
8 11219 bp 59.09 17.85 89.90
NECEvent2014_5_2_scaffold_273 175_001_scaffold_273
Species: Propionibacterium sp. HGH0353 (100%)
15 16487 bp 64.24 18.21 94.62
NECEvent2014_5_2_scaffold_5930 175_001_scaffold_5930
Species: Propionibacterium avidum (50%)
2 1168 bp 61.82 18.24 62.41
NECEvent2014_5_2_scaffold_5941 175_001_scaffold_5941
Species: Propionibacterium sp. HGH0353 (100%)
2 1165 bp 64.81 18.28 88.07
NECEvent2014_5_2_scaffold_5424 175_001_scaffold_5424
Species: Propionibacterium sp. KPL1852 (50%)
2 1254 bp 63.80 18.30 78.95
NECEvent2014_5_2_scaffold_6840 175_001_scaffold_6840
Species: Propionibacterium sp. HGH0353 (100%)
1 1037 bp 61.52 18.37 99.81
NECEvent2014_5_2_scaffold_1198 175_001_scaffold_1198
Species: Propionibacterium sp. HGH0353 (66.67%)
3 3861 bp 64.98 18.45 90.52
NECEvent2014_5_2_scaffold_770 175_001_scaffold_770
Species: Propionibacterium sp. HGH0353 (83.33%)
12 5721 bp 59.59 18.46 87.47
NECEvent2014_5_2_scaffold_4778 175_001_scaffold_4778
Species: Propionibacterium avidum (50%)
2 1379 bp 63.60 18.49 86.51
NECEvent2014_5_2_scaffold_6457 175_001_scaffold_6457
Genus: Propionibacterium (100%)
3 1087 bp 65.32 18.49 88.32
NECEvent2014_5_2_scaffold_230 175_001_scaffold_230
Genus: Actinomyces (50%)
16 18787 bp 60.83 18.50 94.49
NECEvent2014_5_2_scaffold_1709 175_001_scaffold_1709
Species: Propionibacterium avidum (50%)
4 2980 bp 61.34 18.52 79.63
NECEvent2014_5_2_scaffold_2601 175_001_scaffold_2601
Genus: Propionibacterium (66.67%)
3 2151 bp 59.14 18.55 75.17
NECEvent2014_5_2_scaffold_3210 175_001_scaffold_3210
Species: Propionibacterium humerusii (50%)
2 1847 bp 61.13 18.68 98.59
NECEvent2014_5_2_scaffold_164 175_001_scaffold_164
Species: Propionibacterium sp. HGH0353 (100%)
23 25033 bp 61.51 18.68 86.68
NECEvent2014_5_2_scaffold_4979 175_001_scaffold_4979
Species: Propionibacterium sp. KPL2005 (50%)
2 1341 bp 64.06 18.68 78.75
NECEvent2014_5_2_scaffold_334 175_001_scaffold_334
Species: Propionibacterium sp. HGH0353 (84.62%)
13 13188 bp 65.69 18.70 97.04
NECEvent2014_5_2_scaffold_5176 175_001_scaffold_5176
Species: Propionibacterium avidum (50%)
2 1299 bp 65.59 18.82 100.00
NECEvent2014_5_2_scaffold_387 175_001_scaffold_387
Species: Propionibacterium sp. HGH0353 (94.12%)
17 11565 bp 64.51 18.92 79.17
NECEvent2014_5_2_scaffold_5051 175_001_scaffold_5051
Species: Propionibacterium avidum (50%)
2 1323 bp 59.56 18.93 73.02
NECEvent2014_5_2_scaffold_1112 175_001_scaffold_1112
Species: Propionibacterium sp. KPL2005 (100%)
4 4079 bp 59.23 18.94 87.60
NECEvent2014_5_2_scaffold_1742 175_001_scaffold_1742
Genus: Propionibacterium (75%)
8 2922 bp 58.93 19.05 80.39
NECEvent2014_5_2_scaffold_1060 175_001_scaffold_1060
Species: Propionibacterium sp. KPL1852 (66.67%)
6 4230 bp 65.18 19.11 87.66
NECEvent2014_5_2_scaffold_1649 175_001_scaffold_1649
Genus: Propionibacterium (83.33%)
6 3054 bp 57.11 19.16 72.00
NECEvent2014_5_2_scaffold_2301 175_001_scaffold_2301
Species: Propionibacterium sp. HGH0353 (75%)
4 2349 bp 61.81 19.22 82.12
NECEvent2014_5_2_scaffold_2164 175_001_scaffold_2164
Species: Propionibacterium sp. HGH0353 (100%)
3 2461 bp 65.14 19.26 80.09
NECEvent2014_5_2_scaffold_6347 175_001_scaffold_6347
Species: Propionibacterium sp. HGH0353 (100%)
2 1103 bp 63.19 19.31 80.51
NECEvent2014_5_2_scaffold_2219 175_001_scaffold_2219
Genus: Propionibacterium (100%)
4 2415 bp 63.73 19.32 80.12
NECEvent2014_5_2_scaffold_712 175_001_scaffold_712
Species: Propionibacterium acnes (66.67%)
3 6227 bp 60.85 19.32 91.79
Displaying items 101-150 of 695 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.