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NECEvent2014_5_3_scaffold_22

Alias: 175_002_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_22_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49..462
DNA (414bp) protein (138aa)
Transcriptional regulator, Fur family n=2 Tax=Clostridium botulinum E RepID=B2V1V8_CLOBA
Fur family transcriptional regulator
Fur family transcriptional regulator {ECO:0000313|EMBL:KIL08978.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_5_3_scaffold_22_2
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(589..1020)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CEQ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR27772.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_5_3_scaffold_22_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1103..1894)
DNA (792bp) protein (264aa)
Putative metal ion ABC transporter, permease protein n=2 Tax=Clostridium botulinum B RepID=B2TLC4_CLOBB rbh
high-affinity Zinc uptake system membrane protein ZnuB
Putative ABC transporter, permease protein {ECO:0000313|EMBL:CDH89695.1}; Putative metal ion ABC transporter, permease protein {ECO:0000313|EMBL:ACD24335.1}; TaxID=935198 species="Bacteria; Firmicutes
NECEvent2014_5_3_scaffold_22_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1897..2571)
DNA (675bp) protein (225aa)
zinc import ATP-binding protein ZnuC (EC:3.6.3.-)
Putative metal ion ABC transporter, ATP-binding protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UPY8_CLOBO
Putative metal ion ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EES48923.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
NECEvent2014_5_3_scaffold_22_5
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2696..3091)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MA05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHJ01544.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
NECEvent2014_5_3_scaffold_22_6
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3310..3708
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EIZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG01217.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
NECEvent2014_5_3_scaffold_22_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3754..5550
DNA (1797bp) protein (599aa)
pepF; oligoendopeptidase F (EC:3.4.24.-)
Oligoendopeptidase F n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QNF5_9CLOT rbh
Oligoendopeptidase F {ECO:0000313|EMBL:EKY29451.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
NECEvent2014_5_3_scaffold_22_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5651..6787
DNA (1137bp) protein (379aa)
NAD/NADP octopine/nopaline dehydrogenase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIJ4_9CLOT rbh
NAD/NADP octopine/nopaline dehydrogenase {ECO:0000313|EMBL:EKY27402.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatu
hypothetical protein
NECEvent2014_5_3_scaffold_22_9
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6956..7855
DNA (900bp) protein (300aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=R0ALL3_CLOBU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68161.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_5_3_scaffold_22_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7928..8269
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SU41_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG85333.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_5_3_scaffold_22_11
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8469..10391
DNA (1923bp) protein (641aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6GNG5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDB15697.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_5_3_scaffold_22_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10523..10711
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT48_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42622.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_5_3_scaffold_22_13
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11114..11545
DNA (432bp) protein (144aa)
18 kDa heat shock protein Hsp n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPE3_CLOSA
hsp; 18 kDa heat shock protein Hsp
18 kDa heat shock protein Hsp {ECO:0000313|EMBL:AGX41317.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicu
NECEvent2014_5_3_scaffold_22_14
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11562..11996
DNA (435bp) protein (145aa)
18 kDa heat shock protein Hsp n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPE3_CLOSA
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:CDM69831.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_5_3_scaffold_22_15
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12031..12174)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EP68_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG01075.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
NECEvent2014_5_3_scaffold_22_16
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12186..12356)
DNA (171bp) protein (57aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U5S342_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY78254.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10
NECEvent2014_5_3_scaffold_22_17
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12422..12835)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BUS4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20818.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_5_3_scaffold_22_18
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12934..13668)
DNA (735bp) protein (245aa)
Putative DNA metabolism protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SXP3_9CLOT
Putative DNA metabolism protein {ECO:0000313|EMBL:EKQ51023.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley
hypothetical protein
NECEvent2014_5_3_scaffold_22_19
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13672..15021)
DNA (1350bp) protein (450aa)
Putative DNA modification/repair radical SAM protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TVR9_9CLOT rbh
Putative DNA modification/repair radical SAM protein {ECO:0000313|EMBL:EKQ51022.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
radical SAM domain-containing protein
NECEvent2014_5_3_scaffold_22_20
unknown

Not on your lists

comp(15133..16668)
DNA (1536bp) protein (512aa)

This feature has no annotations

NECEvent2014_5_3_scaffold_22_21
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16747..17730
DNA (984bp) protein (328aa)
gluP2; rhomboid protease GluP (EC:3.4.21.105)
Rhomboid protease GluP {ECO:0000313|EMBL:AGF58360.1}; EC=3.4.21.105 {ECO:0000313|EMBL:AGF58360.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
Rhomboid protease GluP n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LYL0_9CLOT
NECEvent2014_5_3_scaffold_22_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17783..18391
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3E5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU70732.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
putative membrane protein
NECEvent2014_5_3_scaffold_22_23
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18588..19826)
DNA (1239bp) protein (413aa)
Putative UV DNA damage endonuclease n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EY54_9CLOT rbh
Putative UV DNA damage endonuclease {ECO:0000313|EMBL:CDG01221.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei J
uvsE; putative UV damage endonuclease
NECEvent2014_5_3_scaffold_22_24
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20047..21393
DNA (1347bp) protein (449aa)
Glutamate dehydrogenase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EJ01_9CLOT rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
glu/Leu/Phe/Val dehydrogenase, dimerization domain protein
NECEvent2014_5_3_scaffold_22_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21683..23074
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF05_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98413.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
glycosyl transferase family protein
NECEvent2014_5_3_scaffold_22_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23340..25283
DNA (1944bp) protein (648aa)
DNA gyrase subunit B {ECO:0000313|EMBL:EEP55547.1}; EC=5.99.1.3 {ECO:0000313|EMBL:EEP55547.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
DNA gyrase subunit B n=3 Tax=Clostridium butyricum RepID=B1QXC9_CLOBU rbh
DNA topoisomerase IV subunit B
NECEvent2014_5_3_scaffold_22_27
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25301..28219
DNA (2919bp) protein (973aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
gyrA; DNA gyrase, A subunit (EC:5.99.1.3)
Putative DNA gyrase subunit A n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EPL6_9CLOT rbh
NECEvent2014_5_3_scaffold_22_28
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28245..28796
DNA (552bp) protein (184aa)
DJ-1 family protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW17_CLOSA
DJ-1 family protein
DJ-1 family protein {ECO:0000313|EMBL:AGX44954.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 1386
NECEvent2014_5_3_scaffold_22_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28818..30587
DNA (1770bp) protein (590aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H498_9CLOT rbh
recJ; single-stranded-DNA-specific exonuclease RecJ
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:AIY82788.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_5_3_scaffold_22_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30639..30821)
DNA (183bp) protein (61aa)
Small, acid-soluble spore protein C1 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHP1_9CLOT
Small, acid-soluble spore protein C1 {ECO:0000313|EMBL:EEH99098.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43
sspC1; small, acid-soluble spore protein
Displaying items 1-30 of 88 in total

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