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NECEvent2014_5_3_scaffold_152

Alias: 175_002_scaffold_152

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_152_1
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

351..2282
DNA (1932bp) protein (644aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F6U0_9CLOT rbh
NECEvent2014_5_3_scaffold_152_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2328..3260)
DNA (933bp) protein (311aa)
Fructokinase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V0W9_CLOBA
fructokinase
Fructokinase {ECO:0000313|EMBL:KIL08233.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_5_3_scaffold_152_3
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3273..4760)
DNA (1488bp) protein (496aa)
scrB; sucrose-6-phosphate hydrolase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=2 Tax=Turicibacter RepID=D4W557_9FIRM rbh
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:EFF64048.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter
NECEvent2014_5_3_scaffold_152_4
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4784..6211)
DNA (1428bp) protein (476aa)
PTS system, sucrose-specific, EIIBCA component family protein n=2 Tax=Turicibacter RepID=D4W556_9FIRM rbh
PTS system, sucrose-specific, EIIBCA component family protein {ECO:0000313|EMBL:EFF64047.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turi
pts system, sucrose-specific, eiibca component family protein
NECEvent2014_5_3_scaffold_152_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6379..7371)
DNA (993bp) protein (331aa)
Transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U2C2_9CLOT rbh
Transcriptional regulator {ECO:0000313|EMBL:EKQ54392.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34
scrR; Transcriptional regulator, LacI family
NECEvent2014_5_3_scaffold_152_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7608..8870)
DNA (1263bp) protein (421aa)
Protein MET17 n=4 Tax=Clostridium butyricum RepID=B1R042_CLOBU rbh
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:ENZ30362.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein
NECEvent2014_5_3_scaffold_152_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9110..9679)
DNA (570bp) protein (190aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
Putative=5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FJ80_9CLOT
NECEvent2014_5_3_scaffold_152_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9758..10873)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XLW4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71807.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_5_3_scaffold_152_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10966..11943)
DNA (978bp) protein (326aa)
Homoserine dehydrogenase {ECO:0000313|EMBL:EOR28002.1}; EC=1.1.1.3 {ECO:0000313|EMBL:EOR28002.1};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
Homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFD0_9CLOT rbh
NECEvent2014_5_3_scaffold_152_10
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11995..13290)
DNA (1296bp) protein (432aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
putative aminopeptidase 2 (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Clostridium colicanis 209318 RepID=N9XTW4_9CLOT rbh
NECEvent2014_5_3_scaffold_152_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13338..14492)
DNA (1155bp) protein (385aa)
N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RB65_CLOPF
N-acetylmuramoyl-L-alanine amidase, family 2 {ECO:0000313|EMBL:EDT22525.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
N-acetylmuramoyl-L-alanine amidase
NECEvent2014_5_3_scaffold_152_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14649..15833
DNA (1185bp) protein (395aa)
Cation efflux family protein n=2 Tax=Clostridium perfringens RepID=B1BUT4_CLOPF rbh
Cation efflux family protein {ECO:0000313|EMBL:EDT22519.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str.
cation efflux family protein
NECEvent2014_5_3_scaffold_152_13
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15899..16624)
DNA (726bp) protein (242aa)
Amino acid ABC transporter ATP-binding protein, PAAT family n=1 Tax=Clostridium intestinale URNW RepID=U2PT36_9CLOT rbh
Amino acid ABC transporter ATP-binding protein, PAAT family {ECO:0000313|EMBL:ERK29590.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
ABC transporter family protein
NECEvent2014_5_3_scaffold_152_14
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16611..17276)
DNA (666bp) protein (222aa)
Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BEY6_CLOPF rbh
Arginine ABC transporter permease {ECO:0000313|EMBL:KEZ85781.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.
amino acid ABC transporter
NECEvent2014_5_3_scaffold_152_15
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17338..18168)
DNA (831bp) protein (277aa)
Amino acid ABC transporter, amino acid-binding protein n=2 Tax=Clostridium perfringens RepID=B1BUT0_CLOPF
Amino acid ABC transporter {ECO:0000313|EMBL:KEZ85780.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
amino acid ABC transporter
NECEvent2014_5_3_scaffold_152_16
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18459..19544
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KVE6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDB75119.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_5_3_scaffold_152_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19613..21712)
DNA (2100bp) protein (700aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WJQ9_9CLOT rbh
phoH-like family protein
NECEvent2014_5_3_scaffold_152_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21791..23707)
DNA (1917bp) protein (639aa)
putative cell division protease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZA1_CLOBA rbh
NECEvent2014_5_3_scaffold_152_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23733..24248)
DNA (516bp) protein (172aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Signal peptidase I n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4Q9_9CLOT
signal peptidase I
NECEvent2014_5_3_scaffold_152_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24248..24469)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JE63_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30879.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_5_3_scaffold_152_21
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24653..25948)
DNA (1296bp) protein (432aa)
lysA; diaminopimelate decarboxylase LysA (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N0B5_CLOSA rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
NECEvent2014_5_3_scaffold_152_22
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26310..26981)
DNA (672bp) protein (224aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=Clostridium intestinale URNW RepID=U2NKU0_9CLOT rbh
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:ERK29486.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
dihydrodipicolinate synthase/N-acetylneuraminate lyase
Displaying 22 items

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