ggKbase home page

NECEvent2014_5_3_scaffold_181

Alias: 175_002_scaffold_181

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_181_1
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(143..556)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MI38_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW19470.1}; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus or
NECEvent2014_5_3_scaffold_181_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

920..1255
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XMP6_9CLOT
putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:KJU73169.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_5_3_scaffold_181_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1322..2689
DNA (1368bp) protein (456aa)
Aminopeptidase n=2 Tax=Clostridium botulinum E RepID=B2UZL8_CLOBA rbh
aminopeptidase
Aminopeptidase {ECO:0000313|EMBL:EES49812.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga
NECEvent2014_5_3_scaffold_181_4
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2818..3375)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJ54_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX42466.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394
NECEvent2014_5_3_scaffold_181_5
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3529..8547)
DNA (5019bp) protein (1673aa)
LPXTG-domain-containing protein cell wall anchor domain n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPU1_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM69259.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
hypothetical protein
NECEvent2014_5_3_scaffold_181_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8848..9792)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BX04_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13762.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_5_3_scaffold_181_7
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9810..10517)
DNA (708bp) protein (236aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M0M5_9CLOT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EHI99297.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
GCN5-like N-acetyltransferase
NECEvent2014_5_3_scaffold_181_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10641..11198)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H810_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98529.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_5_3_scaffold_181_9
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11191..11847)
DNA (657bp) protein (219aa)
phosphorylated carbohydrates phosphatase (EC:3.1.3.-)
HAD hydrolase, family IA, variant 3 n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CGG7_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ERI89604.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;
NECEvent2014_5_3_scaffold_181_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11874..12851)
DNA (978bp) protein (326aa)
Putative Peptide chain release factor 2 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F208_9CLOT rbh
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF43
prfB; peptide chain release factor 2
NECEvent2014_5_3_scaffold_181_11
unknown

Not on your lists

comp(12790..12975)
DNA (186bp) protein (62aa)

This feature has no annotations

NECEvent2014_5_3_scaffold_181_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13035..15560)
DNA (2526bp) protein (842aa)
Protein translocase subunit SecA n=1 Tax=Clostridium colicanis 209318 RepID=N9WD75_9CLOT rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
secA; preprotein translocase, SecA subunit
NECEvent2014_5_3_scaffold_181_13
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15746..16288)
DNA (543bp) protein (181aa)
Ribosomal subunit interface protein n=1 Tax=Clostridium intestinale URNW RepID=U2Q047_9CLOT
ribosome-associated factor Y
Ribosomal subunit interface protein {ECO:0000313|EMBL:ERK32120.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinal
NECEvent2014_5_3_scaffold_181_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16974..17615)
DNA (642bp) protein (214aa)
ComF family protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XMQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU73164.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
phosphoribosyl transferase domain protein
NECEvent2014_5_3_scaffold_181_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17597..18598)
DNA (1002bp) protein (334aa)
Superfamily II DNA/RNA helicase required for DNA uptake n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLT2_CLOSA
superfamily II DNA/RNA helicase required for DNA uptake
Superfamily II DNA/RNA helicase required for DNA uptake {ECO:0000313|EMBL:AGX41550.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
NECEvent2014_5_3_scaffold_181_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18615..20837)
DNA (2223bp) protein (741aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
Helicase, RecD/TraA family n=2 Tax=Clostridium butyricum RepID=M8JFP9_CLOBU rbh
phoH-like family protein
NECEvent2014_5_3_scaffold_181_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20941..22077
DNA (1137bp) protein (379aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=457396 species=
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H499_9CLOT rbh
N-acetylglucosamine-6-phosphate deacetylase
NECEvent2014_5_3_scaffold_181_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22118..23293)
DNA (1176bp) protein (392aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
metK; methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=2 Tax=Clostridium botulinum B RepID=METK_CLOBB rbh
NECEvent2014_5_3_scaffold_181_19
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23764..23856
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01902.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799
NECEvent2014_5_3_scaffold_181_trna_1
unknown

Not on your lists

comp(23768..23849)
DNA (82bp)
transferRNA
Displaying 20 items

View Taxonomy