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NECEvent2014_5_3_scaffold_19_27

Organism: NECEvent2014_5_3_Clostridium_paraputrificum_30_27

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(27886..28755)

Top 3 Functional Annotations

Value Algorithm Source
Ion channel family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4V0X1_CLOBI similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 289.0
  • Bit_score: 230
  • Evalue 1.70e-57
Ion channel protein {ECO:0000313|EMBL:KGJ50566.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 289.0
  • Bit_score: 233
  • Evalue 3.60e-58
Ion channel family similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 292.0
  • Bit_score: 215
  • Evalue 2.70e-53

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Taxonomy

Clostridium sp. NCR → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 870
ATGATTATAATAATTACTATATTAACAATAATTATATTTATTTTAACGGCTTTTGATAGTGTGGATAGAACAAAAGAATATTTTAAGTATGGAATTAAGAGAATTAATATTACTTATAAAAGTCTATGGACAGAGGGGGATTTTCTTGTAAGGATAACTCAAGGTGGAATGATAATTATTACAGAGATATTTAATTTACTTTCTATATATACTATTGTGTTAAAGTATATTAAAGTACATTTTTCTATTGAAGTAGACATGATTTTGAAAACTATTGTTATTATAGTAGGGGTTATAATCGTGCACTATTTAATGGGATATATACTTTTATTGAGTTCTAATCTTCATAGGTATATGAGTATGGGAATTGATAAGAGTATAAAGGGAGATTTCTTACTTACCTATTTTATAACATCTTCTTATGTGATGATACTTATAGTTTTTCCAAATGAATTAAATAAATATACTTTATCTGGTGTATTGGGAATTATAATAAGCTACTTTTTAAATATGAAGTTGTTACTAAAAATAATGAGAAATCCAAGGTATATAAAGTTTGACAGTAAGGATAGAGGGGGATTTTTTCAAGTATTTATTGCAGCTATGTCTATAGTTACTATGATAGTTATAAACTTATTTTTAGGGGTTTCTTTAACTAATATAATAGATAAAGGAGCTTTTTCTTCAAATCCTAATAATTTTGATTTGTTTTATTATACTATAGTAACCTTCACAACAATAGGTTTTGGCGATATAAGCCCTGTATCTAACTTGGCTAAGTTTATGGCTATAGTAATCTCTATTACGAGTATTATTTGTTTAACTATTTTCTTAGGAAGTATTTTTTCATTAAGAGAAAGAAAAGAGTAA
PROTEIN sequence
Length: 290
MIIIITILTIIIFILTAFDSVDRTKEYFKYGIKRINITYKSLWTEGDFLVRITQGGMIIITEIFNLLSIYTIVLKYIKVHFSIEVDMILKTIVIIVGVIIVHYLMGYILLLSSNLHRYMSMGIDKSIKGDFLLTYFITSSYVMILIVFPNELNKYTLSGVLGIIISYFLNMKLLLKIMRNPRYIKFDSKDRGGFFQVFIAAMSIVTMIVINLFLGVSLTNIIDKGAFSSNPNNFDLFYYTIVTFTTIGFGDISPVSNLAKFMAIVISITSIICLTIFLGSIFSLRERKE*