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NECEvent2014_5_3_scaffold_19

Alias: 175_002_scaffold_19

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_19_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(115..666)
DNA (552bp) protein (184aa)
UPF0397 protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFL4_9CLOT
UPF0397 protein CSBG_01112 {ECO:0000256|HAMAP-Rule:MF_01572}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_5_3_scaffold_19_2
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(763..1557)
DNA (795bp) protein (265aa)
Ferredoxin n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDI3_9CLOT rbh
Ferredoxin {ECO:0000313|EMBL:EOR27323.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
ferredoxin
NECEvent2014_5_3_scaffold_19_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1571..2149)
DNA (579bp) protein (193aa)
Electron transport complex, rnfabcdge type, A subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H445_9CLOT rbh
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_
rnfA; RnfABCDGE type electron transport complex subunit A
NECEvent2014_5_3_scaffold_19_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2169..2855)
DNA (687bp) protein (229aa)
Electron transport complex, rnfabcdge type, E subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H386_9CLOT rbh
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_
nqrD; electron transport complex protein RsxE
NECEvent2014_5_3_scaffold_19_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2878..3489)
DNA (612bp) protein (204aa)
RnfABCDGE type electron transport complex subunit G n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CJI4_9CLOT
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sarta
rnfG; RnfABCDGE type electron transport complex subunit G
NECEvent2014_5_3_scaffold_19_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3492..4376)
DNA (885bp) protein (295aa)
RnfABCDGE type electron transport complex subunit D n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDG5_9CLOT rbh
RnfABCDGE type electron transport complex subunit D {ECO:0000313|EMBL:EOR27327.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
rnfD; rnfD/nqrB
NECEvent2014_5_3_scaffold_19_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4419..5582)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEU7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98255.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rnfC; RnfABCDGE type electron transport complex subunit C
NECEvent2014_5_3_scaffold_19_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5865..6629)
DNA (765bp) protein (255aa)
Putative lipoprotein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BWA1_9CLOT
Putative lipoprotein {ECO:0000313|EMBL:EOR21394.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_5_3_scaffold_19_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6791..7084)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH71_CLOPF
nitrous oxide-stimulated promoter family protein
Nitrous oxide-stimulated promoter family protein {ECO:0000313|EMBL:AIY83952.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
NECEvent2014_5_3_scaffold_19_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7077..7514)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FBA0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83828.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_5_3_scaffold_19_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7527..9197)
DNA (1671bp) protein (557aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9EX07_CLOSG rbh
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJD30462.1}; TaxID=1408284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium b
putative ABC transporter ATP-binding protein
NECEvent2014_5_3_scaffold_19_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9197..10936)
DNA (1740bp) protein (580aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2G1_CLOPF rbh
ABC transporter family protein
ABC transporter family protein {ECO:0000313|EMBL:AIY83715.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Su
NECEvent2014_5_3_scaffold_19_13
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11139..12584)
DNA (1446bp) protein (482aa)
dbpA; ATP-dependent RNA helicase DbpA (EC:3.6.4.13)
ATP-dependent RNA helicase DbpA {ECO:0000256|HAMAP-Rule:MF_00965}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00965};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
ATP-dependent RNA helicase DbpA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTH4_CLOSA rbh
NECEvent2014_5_3_scaffold_19_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12723..13790)
DNA (1068bp) protein (356aa)
ABC transporter multidrug-family permease n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C6L4_9CLOT rbh
ABC transporter multidrug-family permease {ECO:0000313|EMBL:EOR24952.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sart
hypothetical protein
NECEvent2014_5_3_scaffold_19_15
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13781..14875)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGA3_9CLOT rbh
Multidrug ABC transporter permease {ECO:0000313|EMBL:KEZ87354.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes
putative membrane protein
NECEvent2014_5_3_scaffold_19_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14888..15823)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEI7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH97962.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_5_3_scaffold_19_17
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15909..16550)
DNA (642bp) protein (214aa)
LuxR family transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI00028963F4 rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ03500.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_5_3_scaffold_19_18
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16554..17705)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2W1_9CLOT rbh
Histidine kinase {ECO:0000313|EMBL:KEZ87357.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
NECEvent2014_5_3_scaffold_19_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17798..19558)
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4G0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99350.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
peptidase S8 and S53, subtilisin, kexin, sedolisin
NECEvent2014_5_3_scaffold_19_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19555..21381)
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H542_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99349.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
peptidase S8/S53 subtilisin kexin sedolisin
NECEvent2014_5_3_scaffold_19_21
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21522..23504)
DNA (1983bp) protein (661aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:000
Hydroxylamine reductase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JGG8_CELLD rbh
hybrid cluster protein
NECEvent2014_5_3_scaffold_19_22
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23524..24198)
DNA (675bp) protein (225aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Clostridium sp. DL-VIII RepID=G7M4L0_9CLOT
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EHJ01585.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D
cyclic nucleotide-binding protein
NECEvent2014_5_3_scaffold_19_23
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24295..24543
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R6FWZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB16620.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_5_3_scaffold_19_24
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24606..25250)
DNA (645bp) protein (215aa)
PAP2 superfamily protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EH43_CLOPA
PAP2 superfamily
PAP2 superfamily protein {ECO:0000313|EMBL:AGK99123.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
NECEvent2014_5_3_scaffold_19_25
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25408..26313
DNA (906bp) protein (302aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBV6_9CLOT rbh
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EKY25426.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cela
oxidoreductase
NECEvent2014_5_3_scaffold_19_26
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26369..27778)
DNA (1410bp) protein (470aa)
Repressor LexA n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2E6U7_9FIRM
LexA repressor {ECO:0000313|EMBL:KAJ53129.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
P-loop ATPase domain fused to LexA-like protein
NECEvent2014_5_3_scaffold_19_27
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27886..28755)
DNA (870bp) protein (290aa)
Ion channel family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4V0X1_CLOBI
Ion channel protein {ECO:0000313|EMBL:KGJ50566.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
Ion channel family
NECEvent2014_5_3_scaffold_19_28
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28808..29539)
DNA (732bp) protein (244aa)
Putative yoxB n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VSQ9_CLOBI rbh
Putative yoxB {ECO:0000313|EMBL:EQK44140.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC
hypothetical protein
NECEvent2014_5_3_scaffold_19_29
unknown

Not on your lists

comp(29609..29782)
DNA (174bp) protein (58aa)

This feature has no annotations

NECEvent2014_5_3_scaffold_19_30
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29853..30590
DNA (738bp) protein (246aa)
Carbohydrate deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01246};; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G6T8_CLOPA
YdjC family protein
Displaying items 1-30 of 86 in total

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