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NECEvent2014_5_3_scaffold_222_9

Organism: NECEvent2014_5_3_Clostridium_paraputrificum_30_27

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 8239..9837

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, AraC family n=1 Tax=Clostridium sp. DL-VIII RepID=G7LY61_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 536.0
  • Bit_score: 691
  • Evalue 6.40e-196
  • rbh
helix-turn-helix domain protein similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 533.0
  • Bit_score: 758
  • Evalue 9.20e-217
Helix-turn-helix domain protein {ECO:0000313|EMBL:AIY83751.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. S similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 533.0
  • Bit_score: 758
  • Evalue 4.60e-216

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1599
ATGAACTTGTATAAGGTATTGATAGTAGATGATGAGGAAGAAATAAGGCATGGAATAATAAAGAAGATTGATTGGGAGAAGTATGGATTTACAGTAGTAGGTGATGCTGAAAATGGAAAGGATGCCATAGATAAAGTTGAAAAGTTTCAGCCAGATATAATTATGACAGACATTAAGATGCCTTTTATGGATGGATTGGAATTGGGGGAATATGTATATAAGGAATCTCCATCAACTAAGATTATAATTTTTTCAGGCTCTGATGATTTAGAATATGCCCATAAAGCTATTAAAATAAATGTAGTTGAATATGTTTTGAAACCTATAAATTCTATAGAATTAATTGAGGTTTTAAAGAAGTTAAAGAATACTATGGATGAAGAGTATAATGAAAAAAAGAATTTTGAGAAGTTAAATAAATATTATCTTGAAAGTCTTCCAATAATGAAAGAAAAGTTTTTGGTTGGGACTATAGAGGGAAGAATAGAAGGTAACAGTTGGGTACAAGCCGGTAAGAAGGTTGGAGTAGAGTTTAATTTTCCATACTTTGCTATTGGTGTTCTATATAACGATAAACTTATAGTTAGTAATGAGCATAAAGAAAACGATTTTGTTGATATATCAATTAAACAAATAGTTGATGAGATATTAGTTAATTATTGTGAAACTATTAGTTTTATCTATTCTGGAAAGGTTATCATAATTAGTAATTTAGATAATAAAGATGGAATTATAAATTTGATTAATGGATTGAATGAAGTTTGTAAAAATTGTGAAAGAGTATTAGGGCAGAAAGTATCCGCCGGCATAGGACAGATAGTTAGAGAGTATGAGGGAATTAGATTTTCCTATAAAATGGCCAGAAATGCACTCCATTACAGAATGGTATTAGGAACAGGAAAAGCTATATATATTGAAGATGTGGAACCAGATAATTCAGTTCAACTTCAATTTGATGAAAATGATGAGAGAGAGCTATTAAATGTTATTAAGTTAAAATCGGGTGGAGAAATAAAGGACTCTATAAGCAACTTATTTTGTAGAATAGAAAAGCTGCTATTGCCTTTTAATAAGTACAAAATTTATTTTATAGAAATAACAACATCCTTATTAAAAGTGGTACAAGCTTACAATATTAAAGTGGAAGAGATTTTTGGGGAAGGTTTTAATTGTTATAGTCACTTAGATGATTTTAATTCTATAAATCAGGCTAAAGAGTGGTTTATAGAAAAATCAATAAGAATTAATAATTTAATTAAAAGAGAAAGAATGGATTCTTCCAAATTATTAATTGAAAAAGCAAAGGAATATATTAACCAAAATTATAGTAATCCTGAACTATCTGTTGAAGCTATTTGTTCTCAGCTACATGTTAGTCCAACCTATTTTTCTACTTTATTTAAAAAGGAGACTGGTAGTAATTTTATAAACTATCTAACAAGTATCAGATTAAATGAGGCTGTAAATTTACTTAATACAACAGACTATAAGTCATATATGATAGCAGAAAAAGTTGGATATACTGAAGCTAATTATTTTAGTTATGTATTTAAAAAGAAATTTGGAGTATCTCCCTCAAAGTATAGAAACGTTAAGTAG
PROTEIN sequence
Length: 533
MNLYKVLIVDDEEEIRHGIIKKIDWEKYGFTVVGDAENGKDAIDKVEKFQPDIIMTDIKMPFMDGLELGEYVYKESPSTKIIIFSGSDDLEYAHKAIKINVVEYVLKPINSIELIEVLKKLKNTMDEEYNEKKNFEKLNKYYLESLPIMKEKFLVGTIEGRIEGNSWVQAGKKVGVEFNFPYFAIGVLYNDKLIVSNEHKENDFVDISIKQIVDEILVNYCETISFIYSGKVIIISNLDNKDGIINLINGLNEVCKNCERVLGQKVSAGIGQIVREYEGIRFSYKMARNALHYRMVLGTGKAIYIEDVEPDNSVQLQFDENDERELLNVIKLKSGGEIKDSISNLFCRIEKLLLPFNKYKIYFIEITTSLLKVVQAYNIKVEEIFGEGFNCYSHLDDFNSINQAKEWFIEKSIRINNLIKRERMDSSKLLIEKAKEYINQNYSNPELSVEAICSQLHVSPTYFSTLFKKETGSNFINYLTSIRLNEAVNLLNTTDYKSYMIAEKVGYTEANYFSYVFKKKFGVSPSKYRNVK*