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NECEvent2014_5_3_scaffold_358_1

Organism: NECEvent2014_5_3_Clostridium_paraputrificum_30_27

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 635..952

Top 3 Functional Annotations

Value Algorithm Source
PTS system cellobiose-specific transporter subunit IIB (EC:2.7.1.69) similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 107.0
  • Bit_score: 124
  • Evalue 1.70e-26
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DFN8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 107.0
  • Bit_score: 127
  • Evalue 9.50e-27
PTS system lactose/cellobiose family IIB component {ECO:0000313|EMBL:CCZ25209.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 107.0
  • Bit_score: 127
  • Evalue 1.30e-26

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Taxonomy

Coprobacillus sp. CAG:235 → Coprobacillus → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 318
ATGAAAAAATTTTACTTGTTTTGTAGTGCAGGTATGTCCACAAGTATGCTTGCAAAAAAGATGCAAAATTGCGCCAATGAAAATAACTTAAAAGTTGAAATTAAAGCTTTTTCAATATCTGTTATGGATGATATTGTAAAAACTGAAAATCCAGATTGTATACTGCTTGGTCCACAAGTTAGATATTTATTAGATGAAACTATAAAGAAATATAGTCCAATACCAATTATGGCTATTAATATGATTGATTATGGAAAAATGGATGGAGAAAAGGTATTAAAGTCTGCAATCTCTTTATATAAACAAAGTAATAAATAG
PROTEIN sequence
Length: 106
MKKFYLFCSAGMSTSMLAKKMQNCANENNLKVEIKAFSISVMDDIVKTENPDCILLGPQVRYLLDETIKKYSPIPIMAINMIDYGKMDGEKVLKSAISLYKQSNK*