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NECEvent2014_5_3_scaffold_358_18

Organism: NECEvent2014_5_3_Clostridium_paraputrificum_30_27

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(12532..12996)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGF4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 154.0
  • Bit_score: 258
  • Evalue 5.20e-66
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG29430.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] m similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 154.0
  • Bit_score: 258
  • Evalue 7.30e-66
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 146.0
  • Bit_score: 197
  • Evalue 3.10e-48

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Taxonomy

[Clostridium] methylpentosum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 465
ATGAATCTAGGAAACAGCTTGTTTCATGCAAGAAAAAAATGTGGGCTTTCTCAAGAGGACGTAGCAGAGAAACTGGGGGTAAGCAGGCAGACCATTTCAAAATGGGAAACAGATGAAACGGTTCCTGACATTTATCAGTCGAAAAAAATGGCTGTGCTGTACAATATGTCGTTGGATGAACTGATTGATTTTGACATTGACATAAATGAGATTCAGGAGATTATTGATAAAACCAGTGAAGAAGTAGAAGAAAAAATTGATTGGACAAATGCATGGGGGAAAAAGTACCCTATTCTGTTAAGATACCAAAGTGAAGTTAATCATCCAAACTATGCTCGTAGATTGTGTGTAATGTTGGATGAATTAAAGCAGGAATATCAATACAGTGAATTAGACAGCTTACTGGTTCTAAAGGATATTTTATACAATGTATGGAAAATGAGAAAAGATAAATCAAAAAGATAA
PROTEIN sequence
Length: 155
MNLGNSLFHARKKCGLSQEDVAEKLGVSRQTISKWETDETVPDIYQSKKMAVLYNMSLDELIDFDIDINEIQEIIDKTSEEVEEKIDWTNAWGKKYPILLRYQSEVNHPNYARRLCVMLDELKQEYQYSELDSLLVLKDILYNVWKMRKDKSKR*