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NECEvent2014_5_3_scaffold_93

Alias: 175_002_scaffold_93

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_93_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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54..851
DNA (798bp) protein (266aa)
Uncharacterized protein n=41 Tax=Staphylococcus epidermidis RepID=Q8CSX0_STAES rbh
Predicted ring-cleavage extradiol dioxygenase
Glyoxalase family protein {ECO:0000313|EMBL:EFE59512.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_5_3_scaffold_93_2

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856..1326
DNA (471bp) protein (157aa)
CHAP domain protein n=2 Tax=Staphylococcus epidermidis RepID=T0D5J5_STAEP rbh
secretory antigen SsaA
CHAP protein {ECO:0000313|EMBL:ETJ17519.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_93_3

Not on your lists

1367..1900
DNA (534bp) protein (178aa)
Lipoprotein signal peptidase n=14 Tax=Staphylococcus epidermidis RepID=F3SW30_STAEP rbh
lspA; lipoprotein signal peptidase
Lipoprotein signal peptidase {ECO:0000313|EMBL:ETJ17518.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_93_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1903..2820
DNA (918bp) protein (306aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyl
Pseudouridine synthase n=48 Tax=Staphylococcus epidermidis RepID=Q8CSW9_STAES rbh
hypothetical protein
NECEvent2014_5_3_scaffold_93_5

Not on your lists

3123..3650
DNA (528bp) protein (176aa)
Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein PyrR (EC:2.4.2.9)
Bifunctional protein PyrR n=45 Tax=Staphylococcus epidermidis RepID=PYRR_STAES rbh
Bifunctional protein pyrR {ECO:0000313|EMBL:ETJ17516.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_93_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3898..5190
DNA (1293bp) protein (431aa)
Uracil permease n=50 Tax=Staphylococcus epidermidis RepID=Q8CPJ8_STAES rbh
Uracil permease
Putative permease {ECO:0000313|EMBL:EFE59507.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_5_3_scaffold_93_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5216..6097
DNA (882bp) protein (294aa)
Aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000255|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000255|HAMAP-Rule:MF_00001}; Short=ATCase {ECO:0000255
Aspartate carbamoyltransferase n=66 Tax=Staphylococcus epidermidis RepID=PYRB_STAES rbh
NECEvent2014_5_3_scaffold_93_8

Not on your lists

6115..7392
DNA (1278bp) protein (426aa)
Dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=48 Tax=Staphylococcus epidermidis RepID=C5Q8I8_STAEP rbh
Dihydroorotase {ECO:0000313|EMBL:ETJ17513.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_93_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7393..8493
DNA (1101bp) protein (367aa)
Carbamoyl-phosphate synthase small chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000255|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000255|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000255|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain n=33 Tax=Staphylococcus epidermidis RepID=CARA_STAES rbh
NECEvent2014_5_3_scaffold_93_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8486..11659
DNA (3174bp) protein (1058aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Stap
carB; carbamoyl-phosphate synthase large chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=13 Tax=Staphylococcus epidermidis RepID=C5Q8J0_STAEP rbh
NECEvent2014_5_3_scaffold_93_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11688..12386
DNA (699bp) protein (233aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase
Orotidine 5'-phosphate decarboxylase n=3 Tax=Staphylococcus epidermidis RepID=D4FJQ1_STAEP rbh
orotidine 5'-phosphate decarboxylase
NECEvent2014_5_3_scaffold_93_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12387..12998
DNA (612bp) protein (204aa)
Orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
Orotate phosphoribosyltransferase n=45 Tax=Staphylococcus epidermidis RepID=PYRE_STAES rbh
NECEvent2014_5_3_scaffold_93_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13024..13230
DNA (207bp) protein (69aa)
Uncharacterized protein n=47 Tax=Staphylococcus epidermidis RepID=Q8CSW6_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59500.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_5_3_scaffold_93_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13768..14175
DNA (408bp) protein (136aa)
Uncharacterized protein n=52 Tax=Staphylococcus epidermidis RepID=Q8CSW5_STAES
hypothetical protein
3-demethylubiquinone-9 3-methyltransferase domain protein {ECO:0000313|EMBL:EFE59498.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epide
NECEvent2014_5_3_scaffold_93_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14237..15934)
DNA (1698bp) protein (566aa)
Fibrinogen binding protein n=8 Tax=Staphylococcus epidermidis RepID=Q8CPJ2_STAES rbh
fibrinogen binding protein
Fibronectin-binding protein A domain protein {ECO:0000313|EMBL:EFE59497.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864
NECEvent2014_5_3_scaffold_93_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16204..16827
DNA (624bp) protein (208aa)
Guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000255|HAMAP-Rule:MF_00328}; EC=2.7.4.8 {ECO:0000255|HAMAP-Rule:MF_00328};; GMP kinase {ECO:0000255|HAMAP-Rule:MF_00328}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Ba
Guanylate kinase n=55 Tax=Staphylococcus epidermidis RepID=KGUA_STAES rbh
NECEvent2014_5_3_scaffold_93_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16827..17039
DNA (213bp) protein (71aa)
rpoZ; DNA-directed RNA polymerase, omega subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; Short=RNAP omega subunit {ECO:0000255|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00366};; RNA polymerase
DNA-directed RNA polymerase subunit omega n=9 Tax=Staphylococcus epidermidis RepID=RPOZ_STAES
NECEvent2014_5_3_scaffold_93_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17566..18765
DNA (1200bp) protein (400aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EFE59494.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EFE59494.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EFE59494.1};; Tax
Pantothenate metabolism flavoprotein n=38 Tax=Staphylococcus epidermidis RepID=Q8CPJ1_STAES rbh
pantothenate metabolism flavoprotein
NECEvent2014_5_3_scaffold_93_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18765..21173
DNA (2409bp) protein (803aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=525375 species="Bacteria; F
PriA ,primosomal protein n=9 Tax=Staphylococcus epidermidis RepID=Q8CPJ0_STAES rbh
PriA,primosomal protein rbh
NECEvent2014_5_3_scaffold_93_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21281..21484)
DNA (204bp) protein (68aa)
Uncharacterized protein n=79 Tax=Staphylococcus epidermidis RepID=Q5HPX7_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54198.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_5_3_scaffold_93_21
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21706..22194
DNA (489bp) protein (163aa)
Peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase-like n=66 Tax=Staphylococcus epidermidis RepID=DEFL_STAEQ rbh
NECEvent2014_5_3_scaffold_93_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22187..23119
DNA (933bp) protein (311aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=525375 species="B
Methionyl-tRNA formyltransferase n=43 Tax=Staphylococcus epidermidis RepID=FMT_STAES rbh
NECEvent2014_5_3_scaffold_93_23
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23116..24423
DNA (1308bp) protein (436aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylo
RNA-binding Sun protein n=26 Tax=Staphylococcus epidermidis RepID=Q8CPI8_STAES rbh
RNA-binding Sun protein
NECEvent2014_5_3_scaffold_93_24
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24426..25520
DNA (1095bp) protein (365aa)
Ribosomal RNA large subunit methyltransferase N (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
Probable dual-specificity RNA methyltransferase RlmN n=39 Tax=Staphylococcus epidermidis RepID=RLMN_STAES rbh
NECEvent2014_5_3_scaffold_93_25
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25527..26270
DNA (744bp) protein (248aa)
Protein phosphatase 2C n=8 Tax=Staphylococcus epidermidis RepID=H3UJQ8_STAEP rbh
PP2C protein phosphatase
Phosphoprotein phosphatase {ECO:0000313|EMBL:ETJ12772.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_5_3_scaffold_93_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26267..28270
DNA (2004bp) protein (668aa)
Protein kinase n=16 Tax=Staphylococcus epidermidis RepID=Q8CSV9_STAES rbh
Serine/threonine protein kinase PrkC, regulator of stationary phase
Kinase domain protein {ECO:0000313|EMBL:EFE59486.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_5_3_scaffold_93_27
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28564..29454
DNA (891bp) protein (297aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococ
GTPase n=1 Tax=Staphylococcus epidermidis RepID=UPI000003B78A rbh
hypothetical protein
NECEvent2014_5_3_scaffold_93_28
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29455..30099
DNA (645bp) protein (215aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source=
Ribulose-phosphate 3-epimerase n=44 Tax=Staphylococcus epidermidis RepID=Q8CPI6_STAES rbh
ribulose-phosphate 3-epimerase
NECEvent2014_5_3_scaffold_93_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30104..30739
DNA (636bp) protein (212aa)
Thiamine diphosphokinase {ECO:0000313|EMBL:EFE59483.1}; EC=2.7.6.2 {ECO:0000313|EMBL:EFE59483.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyloco
Uncharacterized protein n=38 Tax=Staphylococcus epidermidis RepID=Q8CSV7_STAES rbh
hypothetical protein
NECEvent2014_5_3_scaffold_93_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(30822..31010)
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=81 Tax=Staphylococcus epidermidis RepID=RL28_STAEQ
LSU ribosomal protein L28p
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying items 1-30 of 36 in total

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