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NECEvent2014_5_3_scaffold_250

Alias: 175_002_scaffold_250

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_250_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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455..1456
DNA (1002bp) protein (334aa)
arcB-2; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
Ornithine carbamoyltransferase n=47 Tax=Staphylococcus epidermidis RepID=OTC_STAES rbh
NECEvent2014_5_3_scaffold_250_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1479..2411
DNA (933bp) protein (311aa)
arcC; carbamate kinase (EC:2.7.2.2)
Carbamate kinase; EC=2.7.2.2;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Carbamate kinase n=32 Tax=Staphylococcus epidermidis RepID=ARCC_STAEQ rbh
NECEvent2014_5_3_scaffold_250_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2576..4141
DNA (1566bp) protein (522aa)
C4-dicarboxylate anaerobic carrier n=6 Tax=Staphylococcus epidermidis RepID=D4FLF9_STAEP rbh
ArcD-like protein {ECO:0000313|EMBL:AFD28738.1}; TaxID=1282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis.;"
hypothetical protein
NECEvent2014_5_3_scaffold_250_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4411..5178)
DNA (768bp) protein (256aa)
Putative esterase n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J0TPS7_STAEP rbh
Tributyrin esterase
Putative esterase {ECO:0000313|EMBL:EES35384.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
NECEvent2014_5_3_scaffold_250_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5219..5866)
DNA (648bp) protein (216aa)
ABC transporter, permease protein {ECO:0000313|EMBL:EFE58793.1}; EC=3.6.3.32 {ECO:0000313|EMBL:EFE58793.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="
Amino acid ABC transporter, permease protein n=75 Tax=Staphylococcus epidermidis RepID=Q5HKJ0_STAEQ rbh
amino acid ABC transporter permease
NECEvent2014_5_3_scaffold_250_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5869..6828)
DNA (960bp) protein (320aa)
ABC transporter, substrate-binding protein, QAT family {ECO:0000313|EMBL:EFE58794.1}; EC=3.6.3.32 {ECO:0000313|EMBL:EFE58794.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staph
Amino acid ABC transporter, amino acid-binding protein n=43 Tax=Staphylococcus epidermidis RepID=Q5HKI9_STAEQ rbh
Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC
NECEvent2014_5_3_scaffold_250_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6847..7482)
DNA (636bp) protein (212aa)
OpuCB protein n=48 Tax=Staphylococcus epidermidis RepID=Q8CQB7_STAES rbh
Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB
Choline ABC transporter permease {ECO:0000313|EMBL:ESV20967.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
NECEvent2014_5_3_scaffold_250_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7479..8666)
DNA (1188bp) protein (396aa)
Glycine betaine/L-proline transport ATP binding subunit {ECO:0000313|EMBL:EFE58796.1}; EC=3.6.3.32 {ECO:0000313|EMBL:EFE58796.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Stap
Amino acid ABC transporter, ATP-binding protein n=32 Tax=Staphylococcus epidermidis RepID=Q5HKI7_STAEQ rbh
proV; glycine betaine/L-proline transport ATP binding subunit
NECEvent2014_5_3_scaffold_250_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8801..9289)
DNA (489bp) protein (163aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
Uncharacterized protein n=9 Tax=Staphylococcus epidermidis RepID=Q8CTX3_STAES rbh
Uncharacterized protein {ECO:0000313|EMBL:AAW53164.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_5_3_scaffold_250_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9286..10251)
DNA (966bp) protein (322aa)
L-carnitine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02129}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_02129};; Short=L-CDH {ECO:0000256|HAMAP-Rule:MF_02129};; EC=1.1.1.108 {ECO:0000256|HAMAP-Rule:MF_02129
L-carnitine dehydrogenase n=45 Tax=Staphylococcus epidermidis RepID=LCDH_STAES rbh
3-hydroxyacyl-CoA dehydrogenase
NECEvent2014_5_3_scaffold_250_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10251..11147)
DNA (897bp) protein (299aa)
Uncharacterized protein n=3 Tax=Staphylococcus epidermidis RepID=F9LKW4_STAEP rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53166.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_5_3_scaffold_250_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11283..11822)
DNA (540bp) protein (180aa)
Transcriptional regulator, TetR family n=8 Tax=Staphylococcus epidermidis RepID=F9LKW5_STAEP rbh
transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFE58800.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(gr
NECEvent2014_5_3_scaffold_250_13

Not on your lists

comp(12288..13646)
DNA (1359bp) protein (453aa)
Branched-chain amino acid transport system II carrier protein n=40 Tax=Staphylococcus RepID=Q5HKI2_STAEQ rbh
brnQ-2; branched-chain amino acid ABC transporter substrate-binding protein
LIVCS family amino acid:cation symporter {ECO:0000313|EMBL:ETJ20706.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_250_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14000..15217
DNA (1218bp) protein (406aa)
Acetylornithine deacetylase (EC:3.5.1.16) rbh
Peptidase, ArgE/DapE family protein n=32 Tax=Staphylococcus epidermidis RepID=E6JP27_STAEP rbh
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:ESV20960.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
NECEvent2014_5_3_scaffold_250_15
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15356..16111)
DNA (756bp) protein (252aa)
pflA; pyruvate formate-lyase-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus
Pyruvate formate-lyase-activating enzyme n=44 Tax=Staphylococcus epidermidis RepID=PFLA_STAEQ rbh
NECEvent2014_5_3_scaffold_250_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16133..18379)
DNA (2247bp) protein (749aa)
Pyruvate formate-lyase (EC:2.3.1.54)
Formate C-acetyltransferase {ECO:0000313|EMBL:EFE58804.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EFE58804.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphy
Formate C-acetyltransferase n=46 Tax=Staphylococcus epidermidis RepID=C5QB52_STAEP rbh
Displaying 16 items

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