ggKbase home page

NECEvent2014_5_3_scaffold_337

Alias: 175_002_scaffold_337

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_337_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2..82)
DNA (81bp) protein (27aa)
Transposase IS200-like protein (Fragment) n=1 Tax=Staphylococcus epidermidis IS-250 RepID=I0TJG5_STAEP
IS605/IS200-like transposase
Transposase-like protein {ECO:0000313|EMBL:EES34840.1}; Flags: Fragment;; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;
NECEvent2014_5_3_scaffold_337_2

Not on your lists

comp(181..627)
DNA (447bp) protein (149aa)
Transcriptional regulator, putative n=55 Tax=Staphylococcus epidermidis RepID=Q5HKV1_STAEQ
Transcriptional regulator, MarR family
MarR family transcriptional regulator {ECO:0000313|EMBL:ETJ20534.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_337_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

799..2448
DNA (1650bp) protein (550aa)
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein {ECO:0000313|EMBL:EFE58867.1}; EC=4.1.1.74 {ECO:0000313|EMBL:EFE58867.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bac
Pyruvate decarboxylase ; Alpha-keto-acid decarboxylase (EC:4.1.1.1)
Indole-3-pyruvate decarboxylase n=39 Tax=Staphylococcus epidermidis RepID=Q5HKV0_STAEQ rbh
NECEvent2014_5_3_scaffold_337_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2795..3961)
DNA (1167bp) protein (389aa)
Bacterial capsule synthesis protein n=10 Tax=Staphylococcus epidermidis RepID=H3UZS5_STAEP rbh
Capsule biosynthesis protein capA
Bacterial capsule synthesis protein {ECO:0000313|EMBL:EFE58869.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey)
NECEvent2014_5_3_scaffold_337_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4215..4973)
DNA (759bp) protein (253aa)
Tributyrin esterase n=7 Tax=Staphylococcus epidermidis RepID=J0HAQ2_STAEP rbh
Tributyrin esterase
Tributyrin esterase EstA, putative {ECO:0000313|EMBL:AAW53104.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 359
NECEvent2014_5_3_scaffold_337_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5265..5951)
DNA (687bp) protein (229aa)
HTH-type transcriptional regulator ArcR n=19 Tax=Staphylococcus epidermidis RepID=ARCR_STAEQ rbh
Crp/Fnr family transcriptional regulator
ArcR1 {ECO:0000313|EMBL:AHC31360.1}; TaxID=1282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis.;"
NECEvent2014_5_3_scaffold_337_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6197..7600)
DNA (1404bp) protein (468aa)
Arginine/ornithine antiporter n=3 Tax=Staphylococcus epidermidis RepID=H0DP62_STAEP rbh
arcD; arginine-ornithine antiporter
Arginine/ornithine antiporter {ECO:0000313|EMBL:EFE58872.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_5_3_scaffold_337_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7863..8918)
DNA (1056bp) protein (352aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
Ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=18 Tax=Staphylococcus epidermidis RepID=C5QZI1_STAEP rbh
NECEvent2014_5_3_scaffold_337_9

Not on your lists

comp(8975..10210)
DNA (1236bp) protein (412aa)
arcA; arginine deiminase (EC:3.5.3.6)
Arginine deiminase 2 n=28 Tax=Staphylococcus epidermidis RepID=ARCA2_STAES rbh
Arginine deiminase 2 {ECO:0000313|EMBL:ETJ20527.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_337_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10549..11010)
DNA (462bp) protein (154aa)
Arginine repressor n=53 Tax=Staphylococcus epidermidis RepID=Q5HKU1_STAEQ rbh
Arginine pathway regulatory protein ArgR,repressor of arg regulon
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).
NECEvent2014_5_3_scaffold_337_11
unknown

Not on your lists

11121..11312
DNA (192bp) protein (64aa)

This feature has no annotations

NECEvent2014_5_3_scaffold_337_12

Not on your lists

comp(11257..11409)
DNA (153bp) protein (51aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ36566.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_337_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11524..13047)
DNA (1524bp) protein (508aa)
Extracellular elastase; EC=3.4.24.-;; SEPP1; Flags: Precursor;; TaxID=1282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis.;"
Zinc metalloproteinase precursor / aureolysin (EC:3.4.24.29)
Aureolysin n=1 Tax=Staphylococcus epidermidis Scl25 RepID=V6QG05_STAEP rbh
NECEvent2014_5_3_scaffold_337_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13534..14451)
DNA (918bp) protein (306aa)
Acetylornithine deacetylase (EC:3.5.1.16)
Peptidase, ArgE/DapE family {ECO:0000313|EMBL:EFE58877.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFE58877.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyl
Succinyl-diaminopimelate desuccinylase n=12 Tax=Staphylococcus epidermidis RepID=F9LIS1_STAEP rbh
Displaying 14 items

View Taxonomy