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NECEvent2014_5_3_scaffold_374

Alias: 175_002_scaffold_374

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_374_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2..991
DNA (990bp) protein (330aa)
CapB protein n=36 Tax=Staphylococcus epidermidis RepID=Q5HL80_STAEQ rbh
capB; capB protein
CapB protein {ECO:0000313|EMBL:AAW52977.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
NECEvent2014_5_3_scaffold_374_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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993..1445
DNA (453bp) protein (151aa)
CapC protein n=80 Tax=Staphylococcus epidermidis RepID=Q5HL81_STAEQ
capC; capC protein
CapC protein {ECO:0000313|EMBL:AAW52976.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
NECEvent2014_5_3_scaffold_374_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1469..2542
DNA (1074bp) protein (358aa)
CapA protein n=31 Tax=Staphylococcus epidermidis RepID=Q5HL82_STAEQ rbh
capA; capA protein
Bacterial capsule synthesis protein {ECO:0000313|EMBL:EFE59010.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey)
NECEvent2014_5_3_scaffold_374_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2517..2693
DNA (177bp) protein (59aa)
Uncharacterized protein n=16 Tax=Staphylococcus epidermidis RepID=Q5HL83_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW52974.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_5_3_scaffold_374_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2696..4300
DNA (1605bp) protein (535aa)
Gamma-glutamyltranspeptidase PgsD/CapD ,catalyses PGA anchorage to peptidoglycan (EC:2.3.2.2)
Putative gamma-glutamyltransferase {ECO:0000313|EMBL:EFE59008.1}; EC=2.3.2.2 {ECO:0000313|EMBL:EFE59008.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="
Gamma-glutamyltranspeptidase n=44 Tax=Staphylococcus epidermidis RepID=Q5HL84_STAEQ rbh
NECEvent2014_5_3_scaffold_374_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4556..5437
DNA (882bp) protein (294aa)
Sugar transport protein n=19 Tax=Staphylococcus epidermidis RepID=D4FKS5_STAEP rbh
Sugar transport protein {ECO:0000313|EMBL:EFE59007.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5)
NECEvent2014_5_3_scaffold_374_7

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5459..5863
DNA (405bp) protein (135aa)
D-ribose pyranase n=32 Tax=Staphylococcus epidermidis RepID=RBSD_STAEQ
D-ribose pyranase
D-ribose pyranase {ECO:0000313|EMBL:ETJ17403.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_374_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5917..6840
DNA (924bp) protein (308aa)
rbsK; ribokinase (EC:2.7.1.15) rbh
Ribokinase {ECO:0000313|EMBL:EFE59005.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EFE59005.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermi
Ribokinase n=28 Tax=Staphylococcus epidermidis RepID=Q5HL87_STAEQ rbh
NECEvent2014_5_3_scaffold_374_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7131..8621
DNA (1491bp) protein (497aa)
Xylulokinase {ECO:0000313|EMBL:EFE59047.1}; EC=2.7.1.17 {ECO:0000313|EMBL:EFE59047.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epider
Xylulose kinase (EC:2.7.1.17)
Xylulokinase n=17 Tax=Staphylococcus epidermidis RepID=D4FKS2_STAEP rbh
NECEvent2014_5_3_scaffold_374_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8896..9681
DNA (786bp) protein (262aa)
Uncharacterized protein n=33 Tax=Staphylococcus epidermidis RepID=Q5HL89_STAEQ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EFE59046.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_5_3_scaffold_374_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10334..11377
DNA (1044bp) protein (348aa)
Perfringolysin O regulator protein, putative n=67 Tax=Staphylococcus epidermidis RepID=Q5HL91_STAEQ rbh
Transcriptional regulator pfoR
Uncharacterized protein {ECO:0000313|EMBL:EES35113.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
NECEvent2014_5_3_scaffold_374_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11377..12060
DNA (684bp) protein (228aa)
L-serine dehydratase, beta subunit (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:AAW52957.1}; EC=4.3.1.17 {ECO:0000313|EMBL:AAW52957.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; St
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=52 Tax=Staphylococcus epidermidis RepID=Q5HL92_STAEQ rbh
NECEvent2014_5_3_scaffold_374_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12073..12972
DNA (900bp) protein (300aa)
sdhA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=66 Tax=Staphylococcus epidermidis RepID=Q5HL93_STAEQ rbh
Serine dehydratase subunit alpha {ECO:0000313|EMBL:ESV19725.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Displaying 13 items

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