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NECEvent2014_5_3_scaffold_382

Alias: 175_002_scaffold_382

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_382_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(263..739)
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=53 Tax=Staphylococcus epidermidis RepID=GREA_STAEQ rbh
Transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=525375 species="Bacteria
NECEvent2014_5_3_scaffold_382_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(770..1393)
DNA (624bp) protein (208aa)
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|
Uridine kinase n=51 Tax=Staphylococcus epidermidis RepID=URK_STAEQ rbh
NECEvent2014_5_3_scaffold_382_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1393..2661)
DNA (1269bp) protein (423aa)
Peptidase, U32 family {ECO:0000313|EMBL:EFE59832.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFE59832.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcu
Peptidase, U32 family n=48 Tax=Staphylococcus epidermidis RepID=Q5HNT8_STAEQ rbh
U32 family peptidase
NECEvent2014_5_3_scaffold_382_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2679..3602)
DNA (924bp) protein (308aa)
Peptidase, U32 family n=58 Tax=Staphylococcus epidermidis RepID=Q5HNT7_STAEQ rbh
peptidase, U32 family small subunit [C1]
U32 family peptidase {ECO:0000313|EMBL:ETJ09809.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_5_3_scaffold_382_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3605..4240)
DNA (636bp) protein (212aa)
O-methyltransferase family protein n=57 Tax=Staphylococcus epidermidis RepID=Q5HNT6_STAEQ rbh
methyltransferase small domain protein
O-methyltransferase {ECO:0000313|EMBL:EFE59830.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_5_3_scaffold_382_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4669..4977)
DNA (309bp) protein (103aa)
UPF0473 protein SERP1179 n=78 Tax=Staphylococcus epidermidis RepID=Y1179_STAEQ
hypothetical protein
UPF0473 protein HMPREF0794_0387 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey)
NECEvent2014_5_3_scaffold_382_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4992..5420)
DNA (429bp) protein (143aa)
Putative Holliday junction resolvase (EC:3.1.-.-)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=525375 specie
Putative Holliday junction resolvase n=52 Tax=Staphylococcus epidermidis RepID=RUVX_STAEQ
NECEvent2014_5_3_scaffold_382_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5422..5682)
DNA (261bp) protein (87aa)
UPF0297 protein SERP1181 n=80 Tax=Staphylococcus epidermidis RepID=Y1181_STAEQ
hypothetical protein
UPF0297 protein SERP1181 {ECO:0000255|HAMAP-Rule:MF_01507}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / R
NECEvent2014_5_3_scaffold_382_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(5746..8376)
DNA (2631bp) protein (877aa)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=22 Tax=Staphylococcus epidermidis RepID=SYA_STAEQ rbh
NECEvent2014_5_3_scaffold_382_10
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8705..11137)
DNA (2433bp) protein (811aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus
Helicase, RecD/TraA family n=31 Tax=Staphylococcus epidermidis RepID=D4FIJ5_STAEP rbh
RecD-like DNA helicase YrrC
NECEvent2014_5_3_scaffold_382_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11139..11807)
DNA (669bp) protein (223aa)
TPR domain protein n=51 Tax=Staphylococcus epidermidis RepID=Q5HNT0_STAEQ rbh
Tetratricopeptide repeat (TPR) family protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFE59824.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_5_3_scaffold_382_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11970..12929)
DNA (960bp) protein (320aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000255|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000255|HAMAP-Rule:MF_00144};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;"
tRNA-specific 2-thiouridylase MnmA n=44 Tax=Staphylococcus epidermidis RepID=MNMA_STAEQ rbh
mnmA; tRNA-specific 2-thiouridylase MnmA
Displaying 12 items

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