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NECEvent2014_5_3_scaffold_389

Alias: 175_002_scaffold_389

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_389_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(89..1624)
DNA (1536bp) protein (512aa)
Sodium/proline symporter n=23 Tax=Staphylococcus epidermidis RepID=PUTP_STAEQ rbh
putP; sodium/proline symporter
Sodium/proline symporter; Proline permease; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
NECEvent2014_5_3_scaffold_389_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2001..2303
DNA (303bp) protein (101aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000255|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000255|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=45 Tax=Staphylococcus epidermidis RepID=GATC_STAEQ
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C
NECEvent2014_5_3_scaffold_389_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2305..3762
DNA (1458bp) protein (486aa)
Aspartyl-tRNA(Asn) amidotransferase subunit A @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000255|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000255|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000255|HAMAP-Rule:MF_00120};; TaxID=176280
Glutamyl-tRNA(Gln) amidotransferase subunit A n=41 Tax=Staphylococcus epidermidis RepID=GATA_STAES rbh
NECEvent2014_5_3_scaffold_389_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3775..5202
DNA (1428bp) protein (476aa)
Aspartyl-tRNA(Asn) amidotransferase subunit B @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC:6.3.5.6)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000255|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000255|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=51 Tax=Staphylococcus epidermidis RepID=GATB_STAEQ rbh
NECEvent2014_5_3_scaffold_389_5

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5427..6377
DNA (951bp) protein (317aa)
Diacylglycerol kinase n=16 Tax=Staphylococcus epidermidis RepID=DAGK_STAEQ rbh
lipid kinase
Diacylglycerol kinase {ECO:0000313|EMBL:ETJ21438.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_389_6

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6409..7827
DNA (1419bp) protein (473aa)
RNA methyltransferase n=1 Tax=Staphylococcus epidermidis RepID=UPI00000E4F54 rbh
RNA methyltransferase-like protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ21437.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_389_7

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7971..8513
DNA (543bp) protein (181aa)
Uncharacterized protein n=42 Tax=Staphylococcus epidermidis RepID=Q5HN38_STAEQ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ21436.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_389_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8823..9893
DNA (1071bp) protein (357aa)
DNA polymerase IV {ECO:0000255|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000255|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000255|HAMAP-Rule:MF_01113};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli
DNA polymerase IV n=41 Tax=Staphylococcus epidermidis RepID=DPO4_STAES rbh
hypothetical protein
NECEvent2014_5_3_scaffold_389_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9924..10478)
DNA (555bp) protein (185aa)
DNA polymerase III polC-type (EC:2.7.7.7)
Exonuclease n=46 Tax=Staphylococcus epidermidis RepID=Q5HN40_STAEQ rbh
Exonuclease {ECO:0000313|EMBL:EFE58528.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_5_3_scaffold_389_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10668..11168)
DNA (501bp) protein (167aa)
Bacterial non-heme ferritin; EC=1.16.3.2;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Ferritin n=70 Tax=Staphylococcus epidermidis RepID=FTN_STAES rbh
ferritin-like domain protein
NECEvent2014_5_3_scaffold_389_11

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11390..12697
DNA (1308bp) protein (436aa)
Mur ligase family protein n=27 Tax=Staphylococcus epidermidis RepID=Q5HN42_STAEQ rbh
UDP-N-acetylmuramyl tripeptide synthase
Mur ligase middle protein {ECO:0000313|EMBL:ETJ21432.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying 11 items

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