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NECEvent2014_5_3_scaffold_454

Alias: 175_002_scaffold_454

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_454_1
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(37..1803)
DNA (1767bp) protein (589aa)
Aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=40 Tax=Staphylococcus epidermidis RepID=SYD_STAEQ rbh
Aspartate-tRNA ligase {ECO:0000313|EMBL:ETJ13476.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_5_3_scaffold_454_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1806..3080)
DNA (1275bp) protein (425aa)
Histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
Histidine--tRNA ligase n=51 Tax=Staphylococcus epidermidis RepID=SYH_STAEQ rbh
NECEvent2014_5_3_scaffold_454_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3452..4327)
DNA (876bp) protein (292aa)
Probable cell wall amidase LytH; EC=3.5.1.-;; Flags: Precursor;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 3598
Probable cell wall amidase LytH n=8 Tax=Staphylococcus epidermidis RepID=LYTH_STAEQ rbh
N-acetylmuramoyl-L-alanine amidase rbh
NECEvent2014_5_3_scaffold_454_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4324..4776)
DNA (453bp) protein (151aa)
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=525375 species="Bacter
D-tyrosyl-tRNA(Tyr) deacylase n=57 Tax=Staphylococcus epidermidis RepID=DTD_STAEQ
NECEvent2014_5_3_scaffold_454_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4790..6979)
DNA (2190bp) protein (730aa)
GTP pyrophosphokinase , (p)ppGpp synthetase I (EC:2.7.6.5)
GTP pyrophosphokinase; EC=2.7.6.5;; (p)ppGpp synthase; ATP:GTP 3'-pyrophosphotransferase; ppGpp synthase I; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="S
GTP pyrophosphokinase n=67 Tax=Staphylococcus epidermidis RepID=RELA_STAEQ rbh
NECEvent2014_5_3_scaffold_454_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7498..8016)
DNA (519bp) protein (173aa)
Adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
Adenine phosphoribosyltransferase n=76 Tax=Staphylococcus epidermidis RepID=APT_STAEQ rbh
NECEvent2014_5_3_scaffold_454_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8035..10308)
DNA (2274bp) protein (758aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:AAW54585.1}; EC=3.1.-.- {ECO:0000313|EMBL:AAW54585.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.
Single-stranded-DNA-specific exonuclease RecJ n=17 Tax=Staphylococcus epidermidis RepID=Q5HNR5_STAEQ rbh
recJ; single-stranded-DNA-specific exonuclease RecJ
Displaying 7 items

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