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NECEvent2014_5_3_scaffold_459

Alias: 175_002_scaffold_459

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_459_1

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2..1654
DNA (1653bp) protein (551aa)
Serine protease, DegP/HtrA, do-like (EC:3.4.21.-)
Serine protease HtrA-like n=48 Tax=Staphylococcus RepID=HTRAL_STAEQ rbh
Serine protease htrA-like protein {ECO:0000313|EMBL:ETJ20199.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_459_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1672..3030
DNA (1359bp) protein (453aa)
Sodium transport family protein n=41 Tax=Staphylococcus epidermidis RepID=Q5HQE1_STAEQ rbh
Potassium uptake protein, integral membrane component, KtrD
Sodium transport family protein {ECO:0000313|EMBL:AAW54045.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984
NECEvent2014_5_3_scaffold_459_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3169..4674
DNA (1506bp) protein (502aa)
2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.4.16)
5' nucleotidase family protein n=2 Tax=Staphylococcus epidermidis RepID=J0ZKR9_STAEP rbh
5' nucleotidase family protein {ECO:0000313|EMBL:AAW54046.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 /
NECEvent2014_5_3_scaffold_459_4

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comp(4777..5379)
DNA (603bp) protein (201aa)
Abortive infection family protein n=79 Tax=Staphylococcus epidermidis RepID=Q5HQD9_STAEQ rbh
hypothetical protein
CAAX amino terminal protease family protein {ECO:0000313|EMBL:ETJ20196.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_459_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5385..5570)
DNA (186bp) protein (62aa)
Uncharacterized protein n=81 Tax=Staphylococcus epidermidis RepID=Q5HQD8_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54048.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_5_3_scaffold_459_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5775..6761
DNA (987bp) protein (329aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphy
Lipoate-protein ligase A family protein n=48 Tax=Staphylococcus epidermidis RepID=Q5HQD7_STAEQ rbh
lipoate-protein ligase A
NECEvent2014_5_3_scaffold_459_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6839..7057)
DNA (219bp) protein (73aa)
Uncharacterized protein n=81 Tax=Staphylococcus epidermidis RepID=Q5HQD6_STAEQ
IDEAL domain protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54050.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_5_3_scaffold_459_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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7271..7846
DNA (576bp) protein (192aa)
ComK family protein n=75 Tax=Staphylococcus epidermidis RepID=Q5HQD5_STAEQ rbh
ComK family protein
ComK family protein {ECO:0000313|EMBL:AAW54056.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
NECEvent2014_5_3_scaffold_459_trna_1
unknown

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8028..8099
DNA (72bp)
transferRNA
NECEvent2014_5_3_scaffold_459_trna_2
unknown

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8106..8194
DNA (89bp)
transferRNA
NECEvent2014_5_3_scaffold_459_9
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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9193..9444
DNA (252bp) protein (84aa)
Truncated Pre protein n=40 Tax=Staphylococcus epidermidis RepID=Q8CMM8_STAES
truncated Pre protein
Plasmid recombination enzyme {ECO:0000313|EMBL:ETJ12743.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_5_3_scaffold_459_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9646..9882
DNA (237bp) protein (79aa)
Uncharacterized protein n=42 Tax=Staphylococcus epidermidis RepID=Q8CT45_STAES
recombination protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59322.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_5_3_scaffold_459_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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10095..10436
DNA (342bp) protein (114aa)
Conserved domain protein n=39 Tax=Staphylococcus epidermidis RepID=Q5HQD4_STAEQ
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:AAW54057.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A
NECEvent2014_5_3_scaffold_459_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10440..10565
DNA (126bp) protein (42aa)
Uncharacterized protein n=19 Tax=Staphylococcus epidermidis RepID=Q8CT43_STAES
hypothetical protein
LysE/YggA family protein {ECO:0000313|EMBL:EES36525.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Displaying 14 items

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