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NECEvent2014_5_3_scaffold_450_5

Organism: NECEvent2014_5_3_Staphylococcus_epidermidis_32_10

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 ASCG 12 / 38
Location: comp(4448..5365)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 305.0
  • Bit_score: 615
  • Evalue 4.70e-173
truB; tRNA pseudouridine(55) synthase (EC:5.4.99.25) similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 305.0
  • Bit_score: 613
  • Evalue 2.70e-173
tRNA pseudouridine synthase B n=24 Tax=Staphylococcus epidermidis RepID=D4FJI5_STAEP similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 305.0
  • Bit_score: 615
  • Evalue 3.30e-173
  • rbh

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Taxonomy

Staphylococcus sp. DORA_6_22 → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 918
ATGTATAATGGCATACTACCGGTATTTAAGAAACGAGGTTTAACAAGTCACGACGTCGTTTTTAAATTACGTAAAATTTTAAAAATGAAAAAAATTGGTCATACAGGAACATTAGATCCTGAAGTTAATGGTGTGTTACCAATTTGTTTAGGCGATGCGACAAAAGTCAGTGATTATATCATGGAAATGGGAAAAACTTATCACGCTACGATAACGCTAGGAAAGAGTACGACTACTGAAGACCAAACTGGAGATATTTTAGAAACTAGGGCTGTTGATAAGAATGATATTAATGAAGATACGATTGACCAAGTGTTGCAGCAATTTGAGGGGCATATTCAACAAATTCCGCCTATGTATTCTTCTGTTAAAGTAAATGGAAGAAAATTATATGAATATGCGAGAAATAATGAAACTGTCGAACGCCCTAAACGACAAGTTTTTATTAAAGATATACATAGAATATCTGAAGTTACTTTCCAGGAGCAGACATGTCATTTTGAAGTTGAAGTAACATGTGGTAAAGGAACTTATATTAGAACTTTAGCTACAGATATTGGACTTAAACTTGGTTTTCCAGCTCATATGTCACGTCTAACTAGAATTGCTTCTGGCGGTTTTCAATTAGAAAGTAGTTTAACGATTGATCAAATTAAAGAATTACATGAGCATGATTCATTACATAATGAATTGTTTCCTATAGAATATGGCTTAAAAGGTCTGAAATCATTCCAAGTGAAAGATTCAAATTTTAAAAAGAAAATCTGTAACGGTCAAAAATTTCATAAAAAAGTGTTAAGTCAAAATGTTAAAGAACCTTTTATATTTGTCGATAGTAGCACTCAAAAAGTTTTAGCAATATATATAGTTCATCCAGATAAACCTTATGAAATAAAACCTAAAAAAGTTTTTAATTAA
PROTEIN sequence
Length: 306
MYNGILPVFKKRGLTSHDVVFKLRKILKMKKIGHTGTLDPEVNGVLPICLGDATKVSDYIMEMGKTYHATITLGKSTTTEDQTGDILETRAVDKNDINEDTIDQVLQQFEGHIQQIPPMYSSVKVNGRKLYEYARNNETVERPKRQVFIKDIHRISEVTFQEQTCHFEVEVTCGKGTYIRTLATDIGLKLGFPAHMSRLTRIASGGFQLESSLTIDQIKELHEHDSLHNELFPIEYGLKGLKSFQVKDSNFKKKICNGQKFHKKVLSQNVKEPFIFVDSSTQKVLAIYIVHPDKPYEIKPKKVFN*