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NECEvent2014_5_3_scaffold_450

Alias: 175_002_scaffold_450

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_450_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3..500)
DNA (498bp) protein (166aa)
Ribonuclease J {ECO:0000256|PIRNR:PIRNR004803}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR004803};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus e
Ribonuclease J n=36 Tax=Staphylococcus epidermidis RepID=V4QRT5_STAEP
metallo-beta-lactamase
NECEvent2014_5_3_scaffold_450_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(835..2940)
DNA (2106bp) protein (702aa)
pnp; polynucleotide phosphorylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000255|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000255|HAMAP-Rule:MF_01595}; Short=PNPase
Polyribonucleotide nucleotidyltransferase n=49 Tax=Staphylococcus epidermidis RepID=PNP_STAEQ rbh
NECEvent2014_5_3_scaffold_450_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(3072..3341)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=75 Tax=Staphylococcus epidermidis RepID=RS15_STAEQ
SSU ribosomal protein S15p (S13e)
30S ribosomal protein S15 {ECO:0000255|HAMAP-Rule:MF_01343}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;
NECEvent2014_5_3_scaffold_450_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3461..4432)
DNA (972bp) protein (324aa)
Riboflavin kinase / FMN adenylyltransferase (EC:2.7.1.26)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=176279 species="Bacteria; Firmicutes;
Riboflavin biosynthesis protein RibF n=55 Tax=Staphylococcus epidermidis RepID=Q5HPR9_STAEQ rbh
NECEvent2014_5_3_scaffold_450_5
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4448..5365)
DNA (918bp) protein (306aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
truB; tRNA pseudouridine(55) synthase (EC:5.4.99.25)
tRNA pseudouridine synthase B n=24 Tax=Staphylococcus epidermidis RepID=D4FJI5_STAEP rbh
NECEvent2014_5_3_scaffold_450_6
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5503..5853)
DNA (351bp) protein (117aa)
Ribosome-binding factor A n=41 Tax=Staphylococcus epidermidis RepID=RBFA_STAEQ
Ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus s
NECEvent2014_5_3_scaffold_450_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6156..8318)
DNA (2163bp) protein (721aa)
Translation initiation factor IF-2 n=33 Tax=Staphylococcus epidermidis RepID=D4FJI7_STAEP rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylo
Translation initiation factor 2
NECEvent2014_5_3_scaffold_450_8
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8323..8640)
DNA (318bp) protein (106aa)
30S ribosomal protein L7Ae, putative n=52 Tax=Staphylococcus epidermidis RepID=Q5HPS3_STAEQ
50S ribosomal protein L7
Ribosomal protein L7/L12 {ECO:0000313|EMBL:ETJ09095.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_5_3_scaffold_450_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8640..8924)
DNA (285bp) protein (95aa)
Uncharacterized protein n=72 Tax=Staphylococcus epidermidis RepID=Q5HPS4_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59440.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_5_3_scaffold_450_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8942..10165)
DNA (1224bp) protein (408aa)
Transcription termination factor NusA n=23 Tax=Staphylococcus epidermidis RepID=D4FJJ0_STAEP rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epid
Transcription termination protein NusA
NECEvent2014_5_3_scaffold_450_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10186..10653)
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=43 Tax=Staphylococcus epidermidis RepID=RIMP_STAEQ rbh
COG0779: clustered with transcription termination protein NusA
Ribosome maturation factor RimP {ECO:0000255|HAMAP-Rule:MF_01077}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35
Displaying 11 items

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