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NECEvent2014_5_3_scaffold_388

Alias: 175_002_scaffold_388

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_388_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(131..967)
DNA (837bp) protein (279aa)
Transmembrane protein n=22 Tax=Pseudomonas aeruginosa RepID=B7V062_PSEA8 rbh
hypothetical protein
Membrane protein {ECO:0000313|EMBL:EQL42378.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa V
NECEvent2014_5_3_scaffold_388_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(964..1530)
DNA (567bp) protein (189aa)
Beta-lactamase expression regulator AmpD n=37 Tax=Pseudomonas RepID=G3XCW9_PSEAE rbh
N-acetylmuramoyl-L-alanine amidase family protein
N-acetyl-anhydromuranmyl-L-alanine amidase {ECO:0000313|EMBL:AHB58083.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source
NECEvent2014_5_3_scaffold_388_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1681..3936)
DNA (2256bp) protein (752aa)
Thymidine phosphorylase n=5 Tax=Pseudomonas aeruginosa RepID=T5LDZ2_PSEAI rbh
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI77374.1}; Thymidine phosphorylase {ECO:0000313|EMBL:AKE71982.1}; Uncharacterized protein {ECO:0000313|EMBL:CEI15967.1}; TaxID=287 spe
hypothetical protein
NECEvent2014_5_3_scaffold_388_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4222..5070
DNA (849bp) protein (283aa)
Quinolinate phosphoribosyltransferase [decarboxylating] (EC:2.4.2.19)
Quinolinate phosphoribosyltransferase [decarboxylating] n=11 Tax=Pseudomonas RepID=U6AC33_PSEAI rbh
Nicotinate-nucleotide pyrophosphorylase [carboxylating] {ECO:0000313|EMBL:ETU90377.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomo
NECEvent2014_5_3_scaffold_388_trna_1
unknown

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comp(5126..5198)
DNA (73bp)
transferRNA
NECEvent2014_5_3_scaffold_388_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5251..6636)
DNA (1386bp) protein (462aa)
Pilus biogenesis protein n=5 Tax=Pseudomonas aeruginosa RepID=A3LKX3_PSEAI rbh
TfpO {ECO:0000313|EMBL:AAM62145.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
pilus biogenesis protein rbh
NECEvent2014_5_3_scaffold_388_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6712..7176)
DNA (465bp) protein (155aa)
Fimbrial protein n=4 Tax=Pseudomonas aeruginosa RepID=T5KZ14_PSEAI rbh
PilA {ECO:0000313|EMBL:AAM62144.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
fimbrial protein
NECEvent2014_5_3_scaffold_388_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7407..9107
DNA (1701bp) protein (567aa)
Type II secretory protein GspE n=5 Tax=Pseudomonas aeruginosa RepID=T5LA10_PSEAI rbh
pilB; type 4 fimbrial biogenesis protein PilB rbh
Type 4 fimbrial biogenesis protein PilB {ECO:0000313|EMBL:AHW73228.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P
NECEvent2014_5_3_scaffold_388_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9111..10328
DNA (1218bp) protein (406aa)
Pilin biogenesis protein n=18 Tax=Pseudomonas aeruginosa RepID=A3LKX1_PSEAI rbh
type II secretion system protein F rbh
Type 4 fimbrial biogenesis protein PilC {ECO:0000313|EMBL:AHW73229.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P
NECEvent2014_5_3_scaffold_388_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10329..11201
DNA (873bp) protein (291aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=145739
Type 4 prepilin-like proteins leader peptide-processing enzyme n=17 Tax=Pseudomonas aeruginosa RepID=B7V071_PSEA8 rbh
pilD; type 4 prepilin peptidase PilD
NECEvent2014_5_3_scaffold_388_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11198..11809
DNA (612bp) protein (204aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=287 species="Bacteria; Prote
Dephospho-CoA kinase n=2 Tax=Pseudomonas aeruginosa RepID=U8Q5R6_PSEAI rbh
NECEvent2014_5_3_scaffold_388_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11806..12006
DNA (201bp) protein (67aa)
DNA gyrase inhibitor YacG n=118 Tax=Pseudomonas RepID=YACG_PSEA7
DNA gyrase inhibitor
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
NECEvent2014_5_3_scaffold_388_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12043..12252)
DNA (210bp) protein (70aa)
Uncharacterized protein n=107 Tax=Pseudomonas RepID=B7V074_PSEA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD51645.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_5_3_scaffold_388_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12358..12735)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa UDL RepID=U9B500_PSEAI
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ERV71912.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
Displaying 14 items

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