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NECEvent2014_5_3_scaffold_481

Alias: 175_002_scaffold_481

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_481_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..136
DNA (135bp) protein (45aa)
Scaffold protein n=134 Tax=Pseudomonas RepID=G2KX47_PSEAI
FeS cluster assembly scaffold IscU
NifU-like protein {ECO:0000313|EMBL:EZP07116.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa
NECEvent2014_5_3_scaffold_481_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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164..487
DNA (324bp) protein (108aa)
Iron-sulfur cluster assembly protein IscA n=120 Tax=Pseudomonas RepID=A6V0V0_PSEA7
iscA; iron-sulfur cluster assembly protein
Iron-binding protein IscA {ECO:0000256|SAAS:SAAS00037071}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas a
NECEvent2014_5_3_scaffold_481_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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495..1016
DNA (522bp) protein (174aa)
Co-chaperone protein HscB homolog n=125 Tax=Pseudomonas RepID=HSCB_PSEA8 rbh
Co-chaperone protein HscB homolog {ECO:0000256|HAMAP-Rule:MF_00682}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
Chaperone protein HscB
NECEvent2014_5_3_scaffold_481_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1059..2918
DNA (1860bp) protein (620aa)
Chaperone protein HscA homolog n=75 Tax=Pseudomonas RepID=HSCA_PSEAE rbh
Chaperone protein HscA
Chaperone protein HscA homolog; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692
NECEvent2014_5_3_scaffold_481_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2925..3263
DNA (339bp) protein (113aa)
2Fe-2S ferredoxin n=132 Tax=Pseudomonas RepID=FER_PSEAE
2Fe-2S ferredoxin
2Fe-2S ferredoxin {ECO:0000313|EMBL:CDH75571.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa
NECEvent2014_5_3_scaffold_481_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3289..3489
DNA (201bp) protein (67aa)
Uncharacterized protein PA3808 n=129 Tax=Pseudomonas RepID=Y3808_PSEAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EVT84597.1}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_5_3_scaffold_481_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3733..4164
DNA (432bp) protein (144aa)
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000255|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000255|HAMAP-Rule:M
Nucleoside diphosphate kinase n=127 Tax=Pseudomonas RepID=NDK_PSEA7
NECEvent2014_5_3_scaffold_481_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4189..5328
DNA (1140bp) protein (380aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
Dual-specificity RNA methyltransferase RlmN n=112 Tax=Gammaproteobacteria RepID=RLMN_PSEAB rbh
50S rRNA methyltransferase
NECEvent2014_5_3_scaffold_481_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5346..6104
DNA (759bp) protein (253aa)
Type 4 fimbrial biogenesis protein PilF n=123 Tax=Pseudomonas RepID=B7UWI6_PSEA8 rbh
type IV pilus biogenesis/stability protein PilW
Type 4 fimbrial biogenesis protein PilF {ECO:0000313|EMBL:AHW69624.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P
NECEvent2014_5_3_scaffold_481_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6101..7144
DNA (1044bp) protein (348aa)
Uncharacterized protein n=57 Tax=Pseudomonas aeruginosa RepID=I6SEH3_PSEAI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAG07191.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi
NECEvent2014_5_3_scaffold_481_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7141..8256
DNA (1116bp) protein (372aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS0
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=126 Tax=Pseudomonas RepID=ISPG_PSEA8 rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
NECEvent2014_5_3_scaffold_481_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8275..9564
DNA (1290bp) protein (430aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21) rbh
Histidine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000255|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00127}; Short=HisRS {ECO:0000255|HAMAP-Rul
Histidine--tRNA ligase n=19 Tax=Pseudomonas aeruginosa RepID=SYH_PSEA8 rbh
NECEvent2014_5_3_scaffold_481_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9591..10223
DNA (633bp) protein (211aa)
Uncharacterized protein n=76 Tax=Pseudomonas RepID=B7UWJ0_PSEA8 rbh
GTP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:ETU98539.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
Displaying 13 items

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