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NECEvent2014_5_3_scaffold_871

Alias: 175_002_scaffold_871

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_871_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..242)
DNA (240bp) protein (80aa)
TonB-dependent receptor n=1 Tax=Pseudomonas aeruginosa BL15 RepID=U8HYR8_PSEAI
Aerobactin siderophore receptor IutA
TonB-dependent receptor {ECO:0000313|EMBL:ETU88758.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_5_3_scaffold_871_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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861..1166
DNA (306bp) protein (102aa)
Uncharacterized protein n=51 Tax=Pseudomonas RepID=I6SYT1_PSEAI
XRE family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AAG08061.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi
NECEvent2014_5_3_scaffold_871_trna_2
unknown

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comp(1320..1393)
DNA (74bp)
transferRNA
NECEvent2014_5_3_scaffold_871_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1573..2673)
DNA (1101bp) protein (367aa)
Ribosome-binding ATPase YchF n=119 Tax=Pseudomonas RepID=B7V0L9_PSEA8 rbh
GTP-binding and nucleic acid-binding protein YchF
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomo
NECEvent2014_5_3_scaffold_871_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2714..3298)
DNA (585bp) protein (195aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Peptidyl-tRNA hydrolase n=122 Tax=Pseudomonas RepID=PTH_PSEA8 rbh
NECEvent2014_5_3_scaffold_871_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3340..3954)
DNA (615bp) protein (205aa)
50S ribosomal protein L25 n=43 Tax=Pseudomonas RepID=RL25_PSEAB rbh
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1457392 s
NECEvent2014_5_3_scaffold_871_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4071..5099)
DNA (1029bp) protein (343aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=30 Tax=Pseudomonas RepID=N2CAW2_9PSED rbh
NECEvent2014_5_3_scaffold_871_trna_1
unknown

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comp(5071..5142)
DNA (72bp)
transferRNA
NECEvent2014_5_3_scaffold_871_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5179..6027)
DNA (849bp) protein (283aa)
ipk; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; Short=CMK {ECO:0000255|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000255|HAMAP-Rule:MF_00061};; 4-(cytidine-5'-dipho
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Pseudomonas aeruginosa RepID=U8Q6Y6_PSEAI rbh
NECEvent2014_5_3_scaffold_871_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6029..6121)
DNA (93bp) protein (31aa)
Outer-membrane lipoprotein LolB n=1 Tax=Pseudomonas aeruginosa BL04 RepID=U8LXB2_PSEAI
membrane protein
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Displaying 10 items

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