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NECEvent2014_5_4_scaffold_366

Alias: 175_003_scaffold_366

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_4_scaffold_366_1
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3..752
DNA (750bp) protein (250aa)
Putative cell wall hydrolase Tn916-like,CTn6-Orf13 n=1 Tax=Clostridium difficile E1 RepID=U3V4F5_CLODI rbh
hypothetical protein
NlpC/P60 family protein {ECO:0000313|EMBL:EGG59063.1}; TaxID=749517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX1467.;"
NECEvent2014_5_4_scaffold_366_2
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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749..1681
DNA (933bp) protein (311aa)
Uncharacterized protein n=236 Tax=Firmicutes RepID=L7VNU3_LISMN rbh
conjugative transposon protein
Uncharacterized protein {ECO:0000313|EMBL:EFT39101.1}; TaxID=749491 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX2137.;"
NECEvent2014_5_4_scaffold_366_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2058..3977
DNA (1920bp) protein (640aa)
Ribosomal protection protein n=116 Tax=Bacteria RepID=D2Y4K1_STRAG rbh
Tetracycline resistance protein tetM {ECO:0000313|EMBL:KEH94901.1}; TaxID=1443125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum
TetM protein
NECEvent2014_5_4_scaffold_366_4
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(4322..4675)
DNA (354bp) protein (118aa)
Uncharacterized protein n=406 Tax=Bacteria RepID=L7VTH0_LISMN
Tn916, transcriptional regulator
Tn916, transcriptional regulator, putative {ECO:0000313|EMBL:AAM99807.1}; TaxID=208435 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus
NECEvent2014_5_4_scaffold_366_5
Streptococcus pneumoniae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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5035..5223
DNA (189bp) protein (63aa)
Uncharacterized protein n=5 Tax=Bacilli RepID=S7XJ81_STREE
Uncharacterized protein {ECO:0000313|EMBL:CDO19410.1}; TaxID=1313 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pneumoniae.;"
NECEvent2014_5_4_scaffold_366_6
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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5243..5602
DNA (360bp) protein (120aa)
Uncharacterized protein n=15 Tax=Bacilli RepID=A4VUU6_STRSY
hypothetical protein
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EPI34281.1}; TaxID=1244144 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus
NECEvent2014_5_4_scaffold_366_7
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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5599..5829
DNA (231bp) protein (77aa)
Uncharacterized protein n=335 Tax=Bacteria RepID=L7VT00_LISMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERT28239.1}; TaxID=1391468 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis BM4539.;"
NECEvent2014_5_4_scaffold_366_8
Streptococcus infantis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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6290..6493
DNA (204bp) protein (68aa)
Excisionase from transposon Tn916 n=413 Tax=Bacteria RepID=XIS_STRA5
Tn916 ORF1 excisionase
Excisionase {ECO:0000313|EMBL:EGL85906.1}; TaxID=1005705 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus infantis SK1076.;"
NECEvent2014_5_4_scaffold_366_9
Gemella morbillorum, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

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6575..7792
DNA (1218bp) protein (406aa)
Transposase from transposon Tn1545 n=380 Tax=Bacteria RepID=TNR5_STRA5 rbh
integrase
Phage integrase {ECO:0000313|EMBL:EFV35759.1}; TaxID=562982 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella morbillorum M424.;"
NECEvent2014_5_4_scaffold_366_10
Enterobacter sp. MGH 16, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8056..8145
DNA (90bp) protein (30aa)
Membrane protein n=2 Tax=Enterobacter cloacae complex RepID=S9Y505_ENTCL
Surface protein; TaxID=1329825 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter sp. MGH 16.;"
hypothetical protein
Displaying 10 items

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