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NECEvent2014_5_5_scaffold_83

Alias: 175_004_scaffold_83

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_5_scaffold_83_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3..1193
DNA (1191bp) protein (397aa)
UPI0003D5EDB7 related cluster n=1 Tax=unknown RepID=UPI0003D5EDB7 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI87378.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
outer membrane protein
NECEvent2014_5_5_scaffold_83_2
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1254..2522
DNA (1269bp) protein (423aa)
UPI0003D5FD1F related cluster n=1 Tax=unknown RepID=UPI0003D5FD1F rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11006.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
hypothetical protein
NECEvent2014_5_5_scaffold_83_3
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2546..3067
DNA (522bp) protein (174aa)
UPI0003D5F6F2 related cluster n=1 Tax=unknown RepID=UPI0003D5F6F2 rbh
DNA-binding protein {ECO:0000313|EMBL:KGF11007.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5
outer membrane protein
NECEvent2014_5_5_scaffold_83_4
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3071..4030
DNA (960bp) protein (320aa)
UPI0003D5DF9C related cluster n=1 Tax=unknown RepID=UPI0003D5DF9C rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11008.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
hypothetical protein
NECEvent2014_5_5_scaffold_83_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4020..4511
DNA (492bp) protein (164aa)
UPI0003D63F7F related cluster n=1 Tax=unknown RepID=UPI0003D63F7F rbh
Outer membrane protein {ECO:0000313|EMBL:ETI87374.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivo
outer membrane protein
NECEvent2014_5_5_scaffold_83_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4511..5533
DNA (1023bp) protein (341aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales;
UPI0003D645A8 related cluster n=1 Tax=unknown RepID=UPI0003D645A8 rbh
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
NECEvent2014_5_5_scaffold_83_7
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5575..6501
DNA (927bp) protein (309aa)
UPI0003D685FD related cluster n=1 Tax=unknown RepID=UPI0003D685FD rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11010.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
lipid A biosynthesis acyltransferase
NECEvent2014_5_5_scaffold_83_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6498..7154
DNA (657bp) protein (219aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
UPI0003D60513 related cluster n=1 Tax=unknown RepID=UPI0003D60513 rbh
NECEvent2014_5_5_scaffold_83_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7272..9086
DNA (1815bp) protein (605aa)
UPI0003D5B7BA related cluster n=1 Tax=unknown RepID=UPI0003D5B7BA rbh
GTP-binding protein TypA {ECO:0000313|EMBL:ETI89009.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinici
GTP-binding protein TypA
NECEvent2014_5_5_scaffold_83_10
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9122..9760)
DNA (639bp) protein (213aa)
UPI0003D5BDC9 related cluster n=1 Tax=unknown RepID=UPI0003D5BDC9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11013.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_5_scaffold_83_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9915..10889
DNA (975bp) protein (325aa)
UPI0003D5BAA1 related cluster n=1 Tax=unknown RepID=UPI0003D5BAA1 rbh
YihY family protein {ECO:0000313|EMBL:ETI89007.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivoran
putative ribonuclease
NECEvent2014_5_5_scaffold_83_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10965..11471
DNA (507bp) protein (169aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAM
UPI0003D5EA59 related cluster n=1 Tax=unknown RepID=UPI0003D5EA59 rbh
tRNA (cytidine/uridine-2'-O-)-methyltransferase HMPREF0889_0049
NECEvent2014_5_5_scaffold_83_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11458..11829
DNA (372bp) protein (124aa)
UPI0003D5B7F0 related cluster n=1 Tax=unknown RepID=UPI0003D5B7F0
Uncharacterized protein {ECO:0000313|EMBL:ETI89005.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_5_scaffold_83_14
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11826..12770
DNA (945bp) protein (315aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GQ65_SELRL rbh
NECEvent2014_5_5_scaffold_83_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12760..14091
DNA (1332bp) protein (444aa)
Ribonuclease PH {ECO:0000256|SAAS:SAAS00104182}; EC=2.7.7.56 {ECO:0000256|SAAS:SAAS00104188};; EC=3.6.1.19 {ECO:0000256|SAAS:SAAS00020468};; Non-canonical purine NTP pyrophosphatase {ECO:0000256|SAAS:
rph; ribonuclease PH (EC:2.7.7.56)
UPI0003D605B9 related cluster n=1 Tax=unknown RepID=UPI0003D605B9 rbh
NECEvent2014_5_5_scaffold_83_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14112..14897
DNA (786bp) protein (262aa)
UPI0003D65522 related cluster n=1 Tax=unknown RepID=UPI0003D65522 rbh
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF
S-adenosylmethionine decarboxylase proenzyme
NECEvent2014_5_5_scaffold_83_17
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14915..16111
DNA (1197bp) protein (399aa)
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (EC:1.1.1.40)
UPI0003D60A4A related cluster n=1 Tax=unknown RepID=UPI0003D60A4A rbh
Malate dehydrogenase {ECO:0000313|EMBL:KGF11018.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S
NECEvent2014_5_5_scaffold_83_trna_2
unknown

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comp(16444..16514)
DNA (71bp)
transferRNA
NECEvent2014_5_5_scaffold_83_trna_1
unknown

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comp(16521..16594)
DNA (74bp)
transferRNA
NECEvent2014_5_5_scaffold_83_18
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16742..17224
DNA (483bp) protein (161aa)
UPI0003D61DFC related cluster n=1 Tax=unknown RepID=UPI0003D61DFC rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11019.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_5_scaffold_83_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17353..17502
DNA (150bp) protein (50aa)
Uncharacterized protein n=15 Tax=Veillonella RepID=D1BLR5_VEIPT
RSAM-modified six-cysteine peptide {ECO:0000313|EMBL:ETI86785.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus
hypothetical protein
NECEvent2014_5_5_scaffold_83_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17557..18972
DNA (1416bp) protein (472aa)
UPI0003D62443 related cluster n=1 Tax=unknown RepID=UPI0003D62443 rbh
Six-Cys-in-45 modification radical SAM protein {ECO:0000313|EMBL:ETI86784.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Ne
radical SAM domain protein
NECEvent2014_5_5_scaffold_83_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19036..19488
DNA (453bp) protein (151aa)
UPI0003D68A33 related cluster n=1 Tax=unknown RepID=UPI0003D68A33
Uncharacterized protein {ECO:0000313|EMBL:ETI86783.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_5_scaffold_83_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19589..21073
DNA (1485bp) protein (495aa)
UPI0003D671A4 related cluster n=1 Tax=unknown RepID=UPI0003D671A4 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI86782.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_5_scaffold_83_23
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21082..22536
DNA (1455bp) protein (485aa)
UPI0003D5A911 related cluster n=1 Tax=unknown RepID=UPI0003D5A911 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11021.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
hypothetical protein
NECEvent2014_5_5_scaffold_83_24
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22536..23069
DNA (534bp) protein (178aa)
UPI0003D6227F related cluster n=1 Tax=unknown RepID=UPI0003D6227F
Uncharacterized protein {ECO:0000313|EMBL:KGF11022.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
NECEvent2014_5_5_scaffold_83_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23066..24292
DNA (1227bp) protein (409aa)
UPI0003D66D74 related cluster n=1 Tax=unknown RepID=UPI0003D66D74
ABC transporter {ECO:0000313|EMBL:ETI86779.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DO
type II and III secretion system protein
NECEvent2014_5_5_scaffold_83_26
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24321..26234
DNA (1914bp) protein (638aa)
UPI0003D66D74 related cluster n=1 Tax=unknown RepID=UPI0003D66D74 rbh
ABC transporter {ECO:0000313|EMBL:KGF11023.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11
ABC transporter
NECEvent2014_5_5_scaffold_83_27
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27039..28376
DNA (1338bp) protein (446aa)
UPI0003D5BB8C related cluster n=1 Tax=unknown RepID=UPI0003D5BB8C rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI87217.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
4-aminobutyrate aminotransferase
NECEvent2014_5_5_scaffold_83_28
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28388..28816
DNA (429bp) protein (143aa)
UPI0003D6531E related cluster n=1 Tax=unknown RepID=UPI0003D6531E
Membrane protein {ECO:0000313|EMBL:KGF07545.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A1
hypothetical protein
Displaying 30 items

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