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NECEvent2014_5_5_scaffold_102

Alias: 175_004_scaffold_102

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_5_scaffold_102_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(55..207)
DNA (153bp) protein (51aa)
UPI0003D5CDBA related cluster n=1 Tax=unknown RepID=UPI0003D5CDBA
Uncharacterized protein {ECO:0000313|EMBL:ETI89506.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
NECEvent2014_5_5_scaffold_102_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

339..758
DNA (420bp) protein (140aa)
UPI0003D6585B related cluster n=1 Tax=unknown RepID=UPI0003D6585B
Acyl-CoA thioester hydrolase, YbgC/YbaW family {ECO:0000313|EMBL:ETI89505.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Ne
thioesterase superfamily protein
NECEvent2014_5_5_scaffold_102_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

755..1498
DNA (744bp) protein (248aa)
UPI0003D62D16 related cluster n=1 Tax=unknown RepID=UPI0003D62D16 rbh
Glutamate racemase {ECO:0000313|EMBL:ETI87886.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicocc
glutamate racemase
NECEvent2014_5_5_scaffold_102_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1506..2102
DNA (597bp) protein (199aa)
UPI0003D67B5F related cluster n=1 Tax=unknown RepID=UPI0003D67B5F rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI87885.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativ
hypothetical protein
NECEvent2014_5_5_scaffold_102_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2102..2827
DNA (726bp) protein (242aa)
UPI0003D63000 related cluster n=1 Tax=unknown RepID=UPI0003D63000 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI86225.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_5_scaffold_102_6
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3101..5008
DNA (1908bp) protein (636aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
UPI0003D66226 related cluster n=1 Tax=unknown RepID=UPI0003D66226 rbh
threonyl-tRNA synthetase
NECEvent2014_5_5_scaffold_102_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5017..5448
DNA (432bp) protein (144aa)
UPI0003D671A1 related cluster n=1 Tax=unknown RepID=UPI0003D671A1
Uncharacterized protein {ECO:0000313|EMBL:ETI86223.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_5_scaffold_102_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5623..6351
DNA (729bp) protein (243aa)
UPI0003D620A2 related cluster n=1 Tax=unknown RepID=UPI0003D620A2 rbh
Haloacid dehalogenase-like protein hydrolase {ECO:0000313|EMBL:ETI86222.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Nega
haloacid dehalogenase
NECEvent2014_5_5_scaffold_102_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6353..7060
DNA (708bp) protein (236aa)
UPI0003D5A16E related cluster n=1 Tax=unknown RepID=UPI0003D5A16E rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI86221.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_5_scaffold_102_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7060..7329
DNA (270bp) protein (90aa)
UPI0003D64722 related cluster n=1 Tax=unknown RepID=UPI0003D64722
Uncharacterized protein {ECO:0000313|EMBL:ETI86220.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_5_scaffold_102_11
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7329..7898
DNA (570bp) protein (190aa)
UPI0003D66394 related cluster n=1 Tax=unknown RepID=UPI0003D66394 rbh
Maf-like protein HMPREF1633_02210 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostrid
maf protein
NECEvent2014_5_5_scaffold_102_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7898..8593
DNA (696bp) protein (232aa)
UPI0003D63C65 related cluster n=1 Tax=unknown RepID=UPI0003D63C65 rbh
DNA repair protein RadC {ECO:0000313|EMBL:ETI86218.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
DNA repair protein RadC
NECEvent2014_5_5_scaffold_102_13
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8631..9512
DNA (882bp) protein (294aa)
UPI0003D64D4A related cluster n=1 Tax=unknown RepID=UPI0003D64D4A rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF12120.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
LysR family transcriptional regulator
NECEvent2014_5_5_scaffold_102_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9595..9741
DNA (147bp) protein (49aa)
UPI0003D687E2 related cluster n=1 Tax=unknown RepID=UPI0003D687E2
Alcohol dehydrogenase NADP(+) {ECO:0000313|EMBL:ETI86216.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succ
NECEvent2014_5_5_scaffold_102_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9734..10747
DNA (1014bp) protein (338aa)
UPI0003D687E2 related cluster n=1 Tax=unknown RepID=UPI0003D687E2 rbh
Alcohol dehydrogenase NADP(+) {ECO:0000313|EMBL:ETI86216.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succ
oxidoreductase
NECEvent2014_5_5_scaffold_102_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10864..11916)
DNA (1053bp) protein (351aa)
citrate lyase ligase (EC:6.2.1.22)
UPI0003D63DA8 related cluster n=1 Tax=unknown RepID=UPI0003D63DA8 rbh
[citrate (Pro-3S)-lyase] ligase {ECO:0000313|EMBL:ETI86215.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus su
NECEvent2014_5_5_scaffold_102_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12146..12361)
DNA (216bp) protein (72aa)
UPI0003D5D942 related cluster n=1 Tax=unknown RepID=UPI0003D5D942
Uncharacterized protein {ECO:0000313|EMBL:ETI86214.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
NECEvent2014_5_5_scaffold_102_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12417..12701)
DNA (285bp) protein (95aa)
UPI0003D67E83 related cluster n=1 Tax=unknown RepID=UPI0003D67E83
Uncharacterized protein {ECO:0000313|EMBL:ETI86213.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
NECEvent2014_5_5_scaffold_102_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12856..13356
DNA (501bp) protein (167aa)
UPI0003D63FA9 related cluster n=1 Tax=unknown RepID=UPI0003D63FA9 rbh
Conserved protein of DIM6/NTAB family {ECO:0000313|EMBL:ETI86212.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoc
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
NECEvent2014_5_5_scaffold_102_trna_1
unknown

Not on your lists

comp(13891..13979)
DNA (89bp)
transferRNA
NECEvent2014_5_5_scaffold_102_20
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14126..14689)
DNA (564bp) protein (188aa)
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KGF12117.1}; EC=1.11.1.15 {ECO:0000313|EMBL:KGF12117.1};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family X
ahpC; alkyl hydroperoxide reductase (EC:1.11.1.15)
UPI0003D5D2E2 related cluster n=1 Tax=unknown RepID=UPI0003D5D2E2 rbh
NECEvent2014_5_5_scaffold_102_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14786..14974)
DNA (189bp) protein (63aa)
UPI0003D64EC1 related cluster n=1 Tax=unknown RepID=UPI0003D64EC1
Uncharacterized protein {ECO:0000313|EMBL:ETI86210.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
NECEvent2014_5_5_scaffold_102_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15348..16568
DNA (1221bp) protein (407aa)
UPI0003D64DA2 related cluster n=1 Tax=unknown RepID=UPI0003D64DA2 rbh
Inorganic carbon transporter/0-antigen polymerase family protein {ECO:0000313|EMBL:ETI86209.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativico
O-antigen polymerase
NECEvent2014_5_5_scaffold_102_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16997..18508
DNA (1512bp) protein (504aa)
UPI0003D643CC related cluster n=1 Tax=unknown RepID=UPI0003D643CC rbh
Acetyl-CoA hydrolase {ECO:0000313|EMBL:ETI86208.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivora
Acetyl-CoA hydrolase
NECEvent2014_5_5_scaffold_102_24
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18635..20281
DNA (1647bp) protein (549aa)
Methylmalonyl-CoA mutase domain protein n=2 Tax=Dialister RepID=C9LNB3_9FIRM rbh
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KGF12113.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteri
methylmalonyl-CoA mutase large subunit
NECEvent2014_5_5_scaffold_102_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20321..20716
DNA (396bp) protein (132aa)
UPI0003D66128 related cluster n=1 Tax=unknown RepID=UPI0003D66128
B12 binding protein {ECO:0000313|EMBL:ETI86283.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivoran
cobalamin B12-binding domain-containing protein
NECEvent2014_5_5_scaffold_102_26
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20790..21728
DNA (939bp) protein (313aa)
UPI0003D68BD5 related cluster n=1 Tax=unknown RepID=UPI0003D68BD5 rbh
GTPase {ECO:0000313|EMBL:KGF12111.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
LAO/AO transporter ATPase
NECEvent2014_5_5_scaffold_102_27
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21761..22177
DNA (417bp) protein (139aa)
UPI0003D67CE8 related cluster n=1 Tax=unknown RepID=UPI0003D67CE8
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:ETI86285.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succin
methylmalonyl-CoA epimerase
NECEvent2014_5_5_scaffold_102_28
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22235..23764
DNA (1530bp) protein (510aa)
UPI0003D5D6B7 related cluster n=1 Tax=unknown RepID=UPI0003D5D6B7 rbh
Methylmalonyl-CoA carboxyltransferase {ECO:0000313|EMBL:KGF12214.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostrid
carboxyl transferase
NECEvent2014_5_5_scaffold_102_29
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23820..24164
DNA (345bp) protein (115aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridial
Oxaloacetate decarboxylase gamma chain n=1 Tax=Veillonella sp. HPA0037 RepID=S2ZTN3_9FIRM
sodium pump decarboxylase subunit gamma
Displaying items 1-30 of 32 in total

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