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NECEvent2014_5_5_scaffold_117

Alias: 175_004_scaffold_117

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_5_scaffold_117_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2..712
DNA (711bp) protein (237aa)
UPI0003D64DE3 related cluster n=1 Tax=unknown RepID=UPI0003D64DE3 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI85168.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
2-nitropropane dioxygenase
NECEvent2014_5_5_scaffold_117_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

742..1299
DNA (558bp) protein (186aa)
UPI0003D652CB related cluster n=1 Tax=unknown RepID=UPI0003D652CB rbh
Ferripyochelin binding protein Fbp {ECO:0000313|EMBL:ETI85167.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus
hypothetical protein
NECEvent2014_5_5_scaffold_117_3
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1464..1856)
DNA (393bp) protein (131aa)
UPI0003D630AA related cluster n=1 Tax=unknown RepID=UPI0003D630AA
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sed
30S ribosomal protein S9
NECEvent2014_5_5_scaffold_117_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(1876..2316)
DNA (441bp) protein (147aa)
UPI0003D5E9D0 related cluster n=1 Tax=unknown RepID=UPI0003D5E9D0 rbh
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus
50S ribosomal protein L13
NECEvent2014_5_5_scaffold_117_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2623..4770
DNA (2148bp) protein (716aa)
UPI0003D65C30 related cluster n=1 Tax=unknown RepID=UPI0003D65C30 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI85163.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
ornithine decarboxylase
NECEvent2014_5_5_scaffold_117_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


4845..5438
DNA (594bp) protein (198aa)
UPI0003D5D675 related cluster n=1 Tax=unknown RepID=UPI0003D5D675 rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succi
30S ribosomal protein S4
NECEvent2014_5_5_scaffold_117_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5576..7642
DNA (2067bp) protein (689aa)
UPI0003D60BA3 related cluster n=1 Tax=unknown RepID=UPI0003D60BA3 rbh
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ETI85161.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoc
penicillin-binding protein
NECEvent2014_5_5_scaffold_117_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8026..8562)
DNA (537bp) protein (179aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1403945 species="Bacteria; Firmicutes; Negativic
UPI0003D683F6 related cluster n=1 Tax=unknown RepID=UPI0003D683F6 rbh
anaerobic ribonucleoside-triphosphate reductase activating protein
NECEvent2014_5_5_scaffold_117_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8570..10720)
DNA (2151bp) protein (717aa)
UPI0003D6568F related cluster n=1 Tax=unknown RepID=UPI0003D6568F rbh
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:ETI85159.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="N
anaerobic ribonucleoside-triphosphate reductase
NECEvent2014_5_5_scaffold_117_10
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11157..12200
DNA (1044bp) protein (348aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
UPI0003D621DB related cluster n=1 Tax=unknown RepID=UPI0003D621DB rbh
ABC transporter
NECEvent2014_5_5_scaffold_117_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12181..12834
DNA (654bp) protein (218aa)
UPI0003D659B6 related cluster n=1 Tax=unknown RepID=UPI0003D659B6 rbh
Lipoprotein, YaeC family {ECO:0000313|EMBL:ETI85157.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinici
ABC transporter
NECEvent2014_5_5_scaffold_117_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12870..13691
DNA (822bp) protein (274aa)
UPI0003D65E74 related cluster n=1 Tax=unknown RepID=UPI0003D65E74 rbh
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA
D-methionine-binding lipoprotein metQ
NECEvent2014_5_5_scaffold_117_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


13776..13964
DNA (189bp) protein (63aa)
UPI0003D59761 related cluster n=1 Tax=unknown RepID=UPI0003D59761
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succ
50S ribosomal protein L28
NECEvent2014_5_5_scaffold_117_14
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14043..15032)
DNA (990bp) protein (330aa)
UPI0003D643DF related cluster n=1 Tax=unknown RepID=UPI0003D643DF rbh
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000313|EMBL:KGF09921.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source=
deoxyguanosinetriphosphate triphosphohydrolase
NECEvent2014_5_5_scaffold_117_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15041..15859)
DNA (819bp) protein (273aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00
UPI0003D68655 related cluster n=1 Tax=unknown RepID=UPI0003D68655 rbh
phosphotransferase HMPREF0889_1301
NECEvent2014_5_5_scaffold_117_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15856..16503)
DNA (648bp) protein (216aa)
UPI0003D5FD2B related cluster n=1 Tax=unknown RepID=UPI0003D5FD2B rbh
CBS protein {ECO:0000313|EMBL:ETI85152.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_1
CBS domain pair
NECEvent2014_5_5_scaffold_117_17
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16564..18951)
DNA (2388bp) protein (796aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
UPI0003D60C29 related cluster n=1 Tax=unknown RepID=UPI0003D60C29 rbh
phosphoenolpyruvate synthase
NECEvent2014_5_5_scaffold_117_18
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19140..20342)
DNA (1203bp) protein (401aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
UPI0003D5C891 related cluster n=1 Tax=unknown RepID=UPI0003D5C891 rbh
tyrosyl-tRNA synthetase
NECEvent2014_5_5_scaffold_117_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20394..21575)
DNA (1182bp) protein (394aa)
UPI0003D6791D related cluster n=1 Tax=unknown RepID=UPI0003D6791D rbh
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadal
nhaA; pH-dependent sodium/proton antiporter
NECEvent2014_5_5_scaffold_117_20
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21719..22309
DNA (591bp) protein (197aa)
UPI0003D63F20 related cluster n=1 Tax=unknown RepID=UPI0003D63F20 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF09916.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
hypothetical protein
NECEvent2014_5_5_scaffold_117_21
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22370..22546)
DNA (177bp) protein (59aa)
UPI0003D695CE related cluster n=1 Tax=unknown RepID=UPI0003D695CE
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales ba
50S ribosomal protein L32
NECEvent2014_5_5_scaffold_117_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22562..23068)
DNA (507bp) protein (169aa)
UPI0003D5A850 related cluster n=1 Tax=unknown RepID=UPI0003D5A850 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI85146.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_5_scaffold_117_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23259..24227)
DNA (969bp) protein (323aa)
UPI0003D66BBB related cluster n=1 Tax=unknown RepID=UPI0003D66BBB rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI85145.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
Displaying 23 items

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