ggKbase home page

NECEvent2014_5_5_scaffold_313

Alias: 175_004_scaffold_313

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_5_scaffold_313_1
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..755
DNA (753bp) protein (251aa)
UPI0003D67C2D related cluster n=1 Tax=unknown RepID=UPI0003D67C2D rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11788.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
Exopolyphosphatase-like protein
NECEvent2014_5_5_scaffold_313_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

752..2902
DNA (2151bp) protein (717aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
UPI0003D600B0 related cluster n=1 Tax=unknown RepID=UPI0003D600B0 rbh
polyphosphate kinase
NECEvent2014_5_5_scaffold_313_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3290..4267
DNA (978bp) protein (326aa)
UPI0003D5DF3C related cluster n=1 Tax=unknown RepID=UPI0003D5DF3C rbh
3D protein {ECO:0000313|EMBL:ETI86343.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17
hypothetical protein
NECEvent2014_5_5_scaffold_313_4
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4392..4826
DNA (435bp) protein (145aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal pep
UPI0003D61785 related cluster n=1 Tax=unknown RepID=UPI0003D61785
lipoprotein signal peptidase
NECEvent2014_5_5_scaffold_313_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4826..5734
DNA (909bp) protein (303aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Nega
UPI0003D6523C related cluster n=1 Tax=unknown RepID=UPI0003D6523C rbh
pseudouridine synthase
NECEvent2014_5_5_scaffold_313_6
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5734..6267
DNA (534bp) protein (178aa)
UPI0003D5B50A related cluster n=1 Tax=unknown RepID=UPI0003D5B50A rbh
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales ba
bifunctional protein pyrR
NECEvent2014_5_5_scaffold_313_7
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6314..7432)
DNA (1119bp) protein (373aa)
UPI0003D6714D related cluster n=1 Tax=unknown RepID=UPI0003D6714D rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11783.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
transporter, YbiR family
NECEvent2014_5_5_scaffold_313_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7429..8625)
DNA (1197bp) protein (399aa)
UPI0003D687A9 related cluster n=1 Tax=unknown RepID=UPI0003D687A9 rbh
UPF0348 protein HMPREF1633_04450 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridi
hypothetical protein
NECEvent2014_5_5_scaffold_313_9
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9012..9512
DNA (501bp) protein (167aa)
Translation initiation factor IF-3 n=1 Tax=Megasphaera micronuciformis F0359 RepID=E2ZCV7_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. In
translation initiation factor IF-3
NECEvent2014_5_5_scaffold_313_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


9524..9721
DNA (198bp) protein (66aa)
UPI0003D607F7 related cluster n=1 Tax=unknown RepID=UPI0003D607F7
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus
LSU ribosomal protein L35P
NECEvent2014_5_5_scaffold_313_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


9740..10090
DNA (351bp) protein (117aa)
UPI0003D5AE39 related cluster n=1 Tax=unknown RepID=UPI0003D5AE39
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus
50S ribosomal protein L20
NECEvent2014_5_5_scaffold_313_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


10331..10480
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IGN8_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succ
50S ribosomal protein L33
NECEvent2014_5_5_scaffold_313_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10517..10744
DNA (228bp) protein (76aa)
UPI0003D5D105 related cluster n=1 Tax=unknown RepID=UPI0003D5D105
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicocc
preprotein translocase subunit SecE
NECEvent2014_5_5_scaffold_313_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10754..11305
DNA (552bp) protein (184aa)
UPI0003D60133 related cluster n=1 Tax=unknown RepID=UPI0003D60133 rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Ve
NusG antitermination factor
NECEvent2014_5_5_scaffold_313_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


11377..11580
DNA (204bp) protein (68aa)
UPI0003D5A812 related cluster n=1 Tax=unknown RepID=UPI0003D5A812
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succ
50S ribosomal protein L11
Displaying 15 items

View Taxonomy