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NECEvent2014_5_5_scaffold_143

Alias: 175_004_scaffold_143

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_5_scaffold_143_1
Enterobacter sp. Ag1, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..210
DNA (210bp) protein (70aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1202448 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterob
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Enterobacter sp. Ag1 RepID=J0W5W5_9ENTR
sdhA; succinate dehydrogenase
NECEvent2014_5_5_scaffold_143_2
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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226..942
DNA (717bp) protein (239aa)
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enteroba
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Enterobacter sp. R4-368 RepID=R9VWE2_9ENTR rbh
NECEvent2014_5_5_scaffold_143_3
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1216..4023
DNA (2808bp) protein (936aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component n=2 Tax=Enterobacteriaceae RepID=M9VYU2_RAOOR rbh
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:GAL58834.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_5_5_scaffold_143_4
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4038..5264
DNA (1227bp) protein (409aa)
dihydrolipoamide succinyltransferase (EC:2.3.1.61)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex {ECO:0000256|RuleBase:RU361138}; EC=2.3.1.61 {ECO:0000256|RuleBase:RU361138};; 2-oxoglutarate dehydrog
Dihydrolipoamide succinyltransferase n=1 Tax=Enterobacter sp. R4-368 RepID=R9VSM1_9ENTR rbh
NECEvent2014_5_5_scaffold_143_5
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5286..6548
DNA (1263bp) protein (421aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
Succinyl-CoA ligase [ADP-forming] subunit beta n=2 Tax=Salmonella choleraesuis RepID=SUCC_SALAR rbh
sucC; succinyl-CoA synthetase subunit beta
NECEvent2014_5_5_scaffold_143_6
Salmonella bongori, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6548..7417
DNA (870bp) protein (290aa)
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1197719 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ente
Succinyl-CoA ligase [ADP-forming] subunit alpha n=2 Tax=Salmonella bongori RepID=F8VCR2_SALBC rbh
NECEvent2014_5_5_scaffold_143_7
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7492..7941)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2INI7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EJI88469.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radic
HxlR family transcriptional regulator
NECEvent2014_5_5_scaffold_143_8
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8031..9263
DNA (1233bp) protein (411aa)
transporter n=1 Tax=Enterobacter cloacae RepID=UPI0002DCBEE5 rbh
membrane protein
Membrane protein {ECO:0000313|EMBL:AHJ74703.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1
NECEvent2014_5_5_scaffold_143_9
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9282..10637
DNA (1356bp) protein (452aa)
pyridoxal-dependent decarboxylase n=1 Tax=Erwinia carotovora RepID=UPI0001A431D4 rbh
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:KFF67023.1}; TaxID=180957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="P
Pyridoxal-dependent decarboxylase rbh
NECEvent2014_5_5_scaffold_143_10
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11334..12902
DNA (1569bp) protein (523aa)
Cytochrome d ubiquinol oxidase subunit 1 n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IMB7_9ENTR rbh
CydA protein {ECO:0000313|EMBL:KIS42202.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
cytochrome BD oxidase subunit I
NECEvent2014_5_5_scaffold_143_11
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12918..14057
DNA (1140bp) protein (380aa)
Cytochrome d ubiquinol oxidase subunit II {ECO:0000313|EMBL:CEJ65934.1}; EC=1.10.3.- {ECO:0000313|EMBL:CEJ65934.1};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteri
Cytochrome d ubiquinol oxidase, subunit II n=1 Tax=Shigella flexneri 1235-66 RepID=I6H8J7_SHIFL rbh
cydB; cytochrome d ubiquinol oxidase subunit 2
NECEvent2014_5_5_scaffold_143_12
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14072..14188
DNA (117bp) protein (39aa)
Riboflavin synthase subunit beta n=136 Tax=Enterobacteriaceae RepID=A6T6G0_KLEP7
hypothetical protein
Riboflavin synthase subunit beta {ECO:0000313|EMBL:ABR76181.1}; TaxID=272620 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsi
NECEvent2014_5_5_scaffold_143_13
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14188..14481
DNA (294bp) protein (98aa)
Cyd operon protein YbgE n=5 Tax=Enterobacter RepID=K4YJ95_9ENTR
Cytochrome bd biosynthesis protein {ECO:0000313|EMBL:KJW96999.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cl
cyd operon protein YbgE
NECEvent2014_5_5_scaffold_143_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14689..15093
DNA (405bp) protein (135aa)
Tol-pal system-associated acyl-CoA thioesterase n=132 Tax=Bacteria RepID=D3RM62_KLEVT
acyl-CoA thioesterase
4-hydroxybenzoyl-CoA thioesterase family active site {ECO:0000313|EMBL:CDL58287.1}; TaxID=1432560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
NECEvent2014_5_5_scaffold_143_15
Enterobacter sp. MGH 14, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15090..15782
DNA (693bp) protein (231aa)
TolQ n=2 Tax=Enterobacter cloacae RepID=G8LF26_ENTCL rbh
colicin uptake protein TolQ
Protein tolQ {ECO:0000313|EMBL:ERP06578.1}; TaxID=1329823 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" s
NECEvent2014_5_5_scaffold_143_16
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15786..16223
DNA (438bp) protein (146aa)
Protein TolR n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QAZ3_9ENTR
TolR protein {ECO:0000313|EMBL:KIS43425.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
colicin uptake protein TolR
NECEvent2014_5_5_scaffold_143_17
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16262..17554
DNA (1293bp) protein (431aa)
Protein TolA n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2INJ5_9ENTR rbh
TolA protein {ECO:0000313|EMBL:KIS45604.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
tolA; membrane protein
NECEvent2014_5_5_scaffold_143_18
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17686..18984
DNA (1299bp) protein (433aa)
Protein TolB n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TPE2_CITRI rbh
tolB; colicin import protein
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Ci
NECEvent2014_5_5_scaffold_143_19
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19012..19524
DNA (513bp) protein (171aa)
Peptidoglycan-associated outer membrane lipoprotein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VWF4_9ENTR rbh
peptidoglycan-associated outer membrane lipoprotein
Peptidoglycan-associated outer membrane lipoprotein {ECO:0000313|EMBL:AHJ74694.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakoni
NECEvent2014_5_5_scaffold_143_20
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19534..20322
DNA (789bp) protein (263aa)
Tol-pal system protein YbgF n=1 Tax=Enterobacter sp. R4-368 RepID=R9VTZ9_9ENTR rbh
YgbF protein {ECO:0000313|EMBL:KIS43313.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
tol-pal system protein YbgF rbh
NECEvent2014_5_5_scaffold_143_trna_1
unknown

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20487..20559
DNA (73bp)
transferRNA
NECEvent2014_5_5_scaffold_143_trna_2
unknown

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20689..20761
DNA (73bp)
transferRNA
NECEvent2014_5_5_scaffold_143_trna_3
unknown

Not on your lists

20768..20840
DNA (73bp)
transferRNA
NECEvent2014_5_5_scaffold_143_trna_4
unknown

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20986..21058
DNA (73bp)
transferRNA
NECEvent2014_5_5_scaffold_143_trna_5
unknown

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21194..21266
DNA (73bp)
transferRNA
Displaying 25 items

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