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NECEvent2014_5_6_scaffold_46

Alias: 175_005_scaffold_46

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_6_scaffold_46_1
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..362)
DNA (360bp) protein (120aa)
endodeoxyribonuclease RusA n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002886801
Uncharacterized protein {ECO:0000313|EMBL:EHL19442.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
endodeoxyribonuclease RusA
NECEvent2014_5_6_scaffold_46_2
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(489..1340)
DNA (852bp) protein (284aa)
DnaD domain protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KWK5_FINMA rbh
DnaD domain protein {ECO:0000313|EMBL:EFL54756.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
hypothetical protein
NECEvent2014_5_6_scaffold_46_3
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1350..1787)
DNA (438bp) protein (146aa)
Single-stranded DNA-binding protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KWK6_FINMA
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=866773 species="Bacteria; Firmicutes; Clostrid
phage-related single-strand DNA-binding protein
NECEvent2014_5_6_scaffold_46_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1780..2451)
DNA (672bp) protein (224aa)
Homing nuclease n=1 Tax=Clostridium botulinum Af84 RepID=S8CWP5_CLOBO
HNH endonuclease family protein {ECO:0000313|EMBL:KEH90464.1}; TaxID=1443126 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D
homing nuclease
NECEvent2014_5_6_scaffold_46_5
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2461..3186)
DNA (726bp) protein (242aa)
Metallo-beta-lactamase domain protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KWK7_FINMA rbh
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFL54687.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS
beta-lactamase superfamily metal-dependent hydrolase
NECEvent2014_5_6_scaffold_46_6
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3196..4050)
DNA (855bp) protein (285aa)
Recombinase, phage RecT family n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW06_FINMA rbh
Recombinase, phage RecT family {ECO:0000313|EMBL:EFL54570.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;
recombinational DNA repair protein (RecE pathway)
NECEvent2014_5_6_scaffold_46_7
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4053..5993)
DNA (1941bp) protein (647aa)
RecF/RecN/SMC N-terminal domain protein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0B3_FINMA rbh
RecF/RecN/SMC N-terminal domain protein {ECO:0000313|EMBL:EGS34174.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna S
hypothetical protein
NECEvent2014_5_6_scaffold_46_8
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6081..6266)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW08_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EFL54630.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
NECEvent2014_5_6_scaffold_46_9
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6245..6559)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW09_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EFL54663.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
NECEvent2014_5_6_scaffold_46_10
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6582..6809)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW10_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EFL54676.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
NECEvent2014_5_6_scaffold_46_11
Anaerococcus tetradius, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6855..7205)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CHI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEI82943.1}; TaxID=525255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus tetradius ATCC 3509
NECEvent2014_5_6_scaffold_46_12
unknown

Not on your lists

comp(7211..7417)
DNA (207bp) protein (69aa)

This feature has no annotations

NECEvent2014_5_6_scaffold_46_13
Anaerococcus tetradius, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7553..7933
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CHJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEI82950.1}; TaxID=525255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus tetradius ATCC 3509
NECEvent2014_5_6_scaffold_46_14
Anaerococcus tetradius, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7912..8106)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CHJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEI82949.1}; TaxID=525255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus tetradius ATCC 3509
NECEvent2014_5_6_scaffold_46_15
Geomicrobium sp. JCM 19038, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8109..8762)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B3 RepID=R0AVF3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:GAK09592.1}; TaxID=1460635 species="Bacteria; Firmicutes; Bacilli; Bacillales; Geomicrobium.;" source="Geomicrobium sp. JCM 19038.;"
hypothetical protein
NECEvent2014_5_6_scaffold_46_16
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8765..9535)
DNA (771bp) protein (257aa)
Phage antirepressor protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW12_FINMA rbh
Phage antirepressor protein {ECO:0000313|EMBL:EFL54678.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
prophage antirepressor
NECEvent2014_5_6_scaffold_46_17
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9557..9778)
DNA (222bp) protein (74aa)
DNA-binding helix-turn-helix protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW13_FINMA
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFL54697.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS0
putative Cro repressor
NECEvent2014_5_6_scaffold_46_18
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9834..10424
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW14_FINMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EFL54578.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
NECEvent2014_5_6_scaffold_46_19
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10460..10612)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW15_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EFL54652.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
NECEvent2014_5_6_scaffold_46_20
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10720..10956
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW16_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EFL54572.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
hypothetical protein
NECEvent2014_5_6_scaffold_46_21
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10959..11126)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW17_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EFL54577.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
hypothetical protein
NECEvent2014_5_6_scaffold_46_22
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11140..11325)
DNA (186bp) protein (62aa)
DNA-binding helix-turn-helix protein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0C0_FINMA
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EGS34159.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY40
NECEvent2014_5_6_scaffold_46_23
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

11401..11634
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G351_ECHVK
hypothetical protein Tax=RBG_16_Chloroflexi_52_11_curated
hypothetical protein
NECEvent2014_5_6_scaffold_46_24
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11631..11843)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW21_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EFL54628.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
NECEvent2014_5_6_scaffold_46_25
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12537..13022
DNA (486bp) protein (162aa)
DNA-binding helix-turn-helix protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW23_FINMA
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFL54704.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS0
cI repressor
NECEvent2014_5_6_scaffold_46_26
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13015..13431
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0C5_FINMA
Putative uncharacterized protein {ECO:0000313|EMBL:EGS34197.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409
putative Zn peptidase
NECEvent2014_5_6_scaffold_46_27
Parvimonas micra, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13569..14273
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SKK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP24128.1}; TaxID=411465 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas micra ATCC 33270.;"
PemK-like protein.
NECEvent2014_5_6_scaffold_46_28
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

14553..16106
DNA (1554bp) protein (518aa)
Uncharacterized protein n=2 Tax=Fusobacterium nucleatum RepID=H1HI34_FUSNU rbh
recombinase
Uncharacterized protein {ECO:0000313|EMBL:EHO76111.1}; TaxID=999414 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum subsp. animalis
NECEvent2014_5_6_scaffold_46_trna_5
unknown

Not on your lists

comp(15965..16045)
DNA (81bp)
transferRNA
NECEvent2014_5_6_scaffold_46_trna_4
unknown

Not on your lists

comp(16052..16125)
DNA (74bp)
transferRNA
Displaying items 1-30 of 85 in total

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