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NECEvent2014_5_6_scaffold_117

Alias: 175_005_scaffold_117

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_6_scaffold_117_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1..234)
DNA (234bp) protein (78aa)
UPI0003D62694 related cluster n=1 Tax=unknown RepID=UPI0003D62694
Inner-membrane translocator {ECO:0000313|EMBL:ETI88172.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succin
inner-membrane translocator
NECEvent2014_5_6_scaffold_117_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(234..1127)
DNA (894bp) protein (298aa)
UPI0003D5E4E9 related cluster n=1 Tax=unknown RepID=UPI0003D5E4E9 rbh
Inner-membrane translocator {ECO:0000313|EMBL:ETI88171.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succin
ABC-type transporter, integral membrane subunit
NECEvent2014_5_6_scaffold_117_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1196..2368)
DNA (1173bp) protein (391aa)
UPI0003D6138C related cluster n=1 Tax=unknown RepID=UPI0003D6138C rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ETI88170.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoc
hypothetical protein
NECEvent2014_5_6_scaffold_117_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2401..3582)
DNA (1182bp) protein (394aa)
UPI0003D62AE4 related cluster n=1 Tax=unknown RepID=UPI0003D62AE4 rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ETI88169.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoc
hypothetical protein
NECEvent2014_5_6_scaffold_117_5
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4276..5166)
DNA (891bp) protein (297aa)
UPI0003D5AAC8 related cluster n=1 Tax=unknown RepID=UPI0003D5AAC8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11937.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
peptidase
NECEvent2014_5_6_scaffold_117_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5163..5678)
DNA (516bp) protein (172aa)
UPI0003D5A418 related cluster n=1 Tax=unknown RepID=UPI0003D5A418 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI86767.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_6_scaffold_117_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5704..6579)
DNA (876bp) protein (292aa)
UPI0003D66769 related cluster n=1 Tax=unknown RepID=UPI0003D66769 rbh
SpoOJ protein {ECO:0000313|EMBL:ETI86766.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA
chromosome partitioning protein ParB
NECEvent2014_5_6_scaffold_117_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6572..7333)
DNA (762bp) protein (254aa)
UPI0003D66E97 related cluster n=1 Tax=unknown RepID=UPI0003D66E97 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI86765.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
Cobyrinic acid ac-diamide synthase
NECEvent2014_5_6_scaffold_117_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7461..8357)
DNA (897bp) protein (299aa)
UPI0003D62DAA related cluster n=1 Tax=unknown RepID=UPI0003D62DAA rbh
Polyphosphate:nucleotide phosphotransferase {ECO:0000313|EMBL:ETI86764.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negat
polyphosphate:nucleotide phosphotransferase
NECEvent2014_5_6_scaffold_117_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8400..9134)
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA
UPI0003D5BC29 related cluster n=1 Tax=unknown RepID=UPI0003D5BC29 rbh
rsmG; putative ribosomal RNA small subunit methyltransferase G
NECEvent2014_5_6_scaffold_117_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9124..11055)
DNA (1932bp) protein (644aa)
UPI0003D60D8D related cluster n=1 Tax=unknown RepID=UPI0003D60D8D rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1403945 species="Bacte
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
NECEvent2014_5_6_scaffold_117_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11021..12403)
DNA (1383bp) protein (461aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Fa
UPI0003D61119 related cluster n=1 Tax=unknown RepID=UPI0003D61119 rbh
tRNA modification GTPase mnmE
NECEvent2014_5_6_scaffold_117_13
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12454..13401)
DNA (948bp) protein (316aa)
UPI0003D6315A related cluster n=1 Tax=unknown RepID=UPI0003D6315A rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11944.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
R3H domain protein
NECEvent2014_5_6_scaffold_117_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13398..14084)
DNA (687bp) protein (229aa)
UPI0003D614BB related cluster n=1 Tax=unknown RepID=UPI0003D614BB rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI86759.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
OxaA-like protein
NECEvent2014_5_6_scaffold_117_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14319..14666)
DNA (348bp) protein (116aa)
UPI0003D69A80 related cluster n=1 Tax=unknown RepID=UPI0003D69A80
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
ribonuclease P protein component
NECEvent2014_5_6_scaffold_117_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15099..16439
DNA (1341bp) protein (447aa)
UPI0003D631AC related cluster n=1 Tax=unknown RepID=UPI0003D631AC rbh
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:ETI86757.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccu
branched-chain amino acid transport system II carrier protein
NECEvent2014_5_6_scaffold_117_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16630..18102
DNA (1473bp) protein (491aa)
UPI0003D5D771 related cluster n=1 Tax=unknown RepID=UPI0003D5D771 rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source
Chromosomal replication initiator protein dnaA
NECEvent2014_5_6_scaffold_117_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18334..19443
DNA (1110bp) protein (370aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1403945 species="Bacte
UPI0003D6870A related cluster n=1 Tax=unknown RepID=UPI0003D6870A rbh
DNA polymerase III subunit beta
NECEvent2014_5_6_scaffold_117_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19445..19663
DNA (219bp) protein (73aa)
UPI0003D659BB related cluster n=1 Tax=unknown RepID=UPI0003D659BB
S4 protein {ECO:0000313|EMBL:ETI86754.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17
S4 domain-containing protein
NECEvent2014_5_6_scaffold_117_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19660..20733
DNA (1074bp) protein (358aa)
UPI0003D59835 related cluster n=1 Tax=unknown RepID=UPI0003D59835 rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae;
DNA replication and repair protein recF
NECEvent2014_5_6_scaffold_117_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20723..21562
DNA (840bp) protein (280aa)
UPI0003D6336E related cluster n=1 Tax=unknown RepID=UPI0003D6336E rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI86752.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_6_scaffold_117_22
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21726..23642
DNA (1917bp) protein (639aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1230730 species="Bacteria; F
UPI0003D5B039 related cluster n=1 Tax=unknown RepID=UPI0003D5B039 rbh
DNA gyrase subunit beta
NECEvent2014_5_6_scaffold_117_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24021..25538
DNA (1518bp) protein (506aa)
UPI0003D5C749 related cluster n=1 Tax=unknown RepID=UPI0003D5C749 rbh
Lysine-specific permease {ECO:0000313|EMBL:ETI86750.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinici
lysine-specific permease
NECEvent2014_5_6_scaffold_117_24
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25701..26756
DNA (1056bp) protein (352aa)
UPI0003D5CDF6 related cluster n=1 Tax=unknown RepID=UPI0003D5CDF6 rbh
RND membrane fusion protein {ECO:0000313|EMBL:ETI86749.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succin
efflux transporter
NECEvent2014_5_6_scaffold_117_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26753..29803
DNA (3051bp) protein (1017aa)
UPI0003D5F145 related cluster n=1 Tax=unknown RepID=UPI0003D5F145 rbh
RND efflux transporter, hydrophobe/amphiphile efflux-1 family {ECO:0000313|EMBL:ETI86748.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccu
acriflavin resistance protein
NECEvent2014_5_6_scaffold_117_26
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30011..31363)
DNA (1353bp) protein (451aa)
UPI0003D6466E related cluster n=1 Tax=unknown RepID=UPI0003D6466E rbh
Prohead protease {ECO:0000313|EMBL:KGF11957.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A1
CBS domain pair
NECEvent2014_5_6_scaffold_117_27
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31509..32291
DNA (783bp) protein (261aa)
RNA-dirted RNA polymerase (EC:2.7.7.6)
UPI0003D5C2C5 related cluster n=1 Tax=unknown RepID=UPI0003D5C2C5 rbh
Exported protein PHISTb {ECO:0000313|EMBL:ETI86745.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
NECEvent2014_5_6_scaffold_117_28
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32349..33158
DNA (810bp) protein (270aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1403945 species="Bacteria; Firmicutes; Negati
UPI0003D6459F related cluster n=1 Tax=unknown RepID=UPI0003D6459F rbh
DNA polymerase IV
Displaying 28 items

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